Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Contrasting patterns of single nucleotide polymorphisms and structural variations across multiple invasions

PROVIDER: PRJNA935977 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR23502954_1.fastq.gz	Fastqsanger.gz
	SRR23502954_2.fastq.gz	Fastqsanger.gz
	SRR23502955_1.fastq.gz	Fastqsanger.gz
	SRR23502955_2.fastq.gz	Fastqsanger.gz
	SRR23502956_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 50

Similar Datasets

Homo sapiens

Project description:Single-nucleotide polymorphisms and TTV

| PRJNA898147 | ENA

Exploratory research to investigate the single nucleotide polymorphisms (SNP) which can predict oxaliplatin-induced neuropathy

Project description:Primary outcome(s): To investigate the single nucleotide polymorphisms correlated with oxaliplatin-induced neuropathy

| 2616724 | ecrin-mdr-crc

Deep coverage proteome analysis of hair shaft for forensic individual identification

Project description:Hair shaft is one of the most common biological evidences found at crime scene. Due to the low amount and high degradation of nuclear DNA in hair shaft, it is difficult to achieve individual identification through routine method. The proteins in the hair shaft are stable and contain genetic polymorphisms in the form of single amino acid polymorphisms (SAPs), translated from non-synonymous single nucleotide polymorphisms (nsSNPs) in the genome.

2022-06-22 | PXD034814 |

Project description:Single Nucleotide Polymorphisms in Amblyomma maculatum

| PRJNA988128 | ENA

Base resolution maps of mutations, 5-methylcytosine and 5-hydroxymethylcytosine, and transcriptome of blood, tumour and margin samples from a glioblastoma multiforme patient

Project description:Glioblastoma multiforme is the most common and aggressive type of brain cancer. Little is known about the complex relationship between genomic and epigenomic as tumour progresses. We present the following base resolution whole genome maps of matched tumour/margin and blood samples from a glioblastoma multiforme patient: * Single nucleotide variations (SNVs), copy number variations (CNVs) and structural variations (SVs) as revealed by DNA sequencing. * 5-methylcytosine and 5-hydroxymethylcytosine levels obtained using (oxidative)bisulfite sequencing. * Transcript levels produced using RNA sequencing. For the three samples with very large bam raw data files ('Blood DNA-seq', 'Margin DNA-seq' and 'Tumour DNA-seq'), bai index files are available from https://www.ebi.ac.uk/arrayexpress/files/E-MTAB-5171/E-MTAB-5171.additional.1.zip

2017-02-24 | E-MTAB-5171 | biostudies-arrayexpress

Project description:Investigation of human single nucleotide polymorphisms TIMP1

| PRJEB60368 | ENA

Project description:Single Nucleotide Polymorphisms database of RIL YHSBLP

| PRJNA648781 | ENA

Project description:The genotyping of twenty single nucleotide polymorphisms

| PRJEB70402 | ENA

Project description:Investigation of human single nucleotide polymorphisms TLR7

| PRJEB51003 | ENA

Project description:Investigation of human single nucleotide polymorphisms IRAK

| PRJEB46209 | ENA