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Transcriptome profiling of mouse CD4+ T cells in the presence or absence of acetate

ABSTRACT: Transcriptome profiling of mouse CD4+ T cells in the presence or absence of acetate

PROVIDER: PRJNA939239 | ENA |

REPOSITORIES: ENA

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			Action	DRS
	SRR23632731_1.fastq.gz	Fastqsanger.gz
	SRR23632731_2.fastq.gz	Fastqsanger.gz
	SRR23632732_1.fastq.gz	Fastqsanger.gz
	SRR23632732_2.fastq.gz	Fastqsanger.gz
	SRR23632733_1.fastq.gz	Fastqsanger.gz

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Similar Datasets

Transcriptome profiling of mouse CD4+ T cells in the presence or absence of acetate

Project description:Transcription profiling was performed on mouse CD4+ T cells treated with or without 10 mM acetate for 24 h. We then performed gene expression profiling analysis using data obtained from RNA-seq of mouse CD4+ T cells.

2023-06-22 | GSE226252 | GEO

Transcriptome profiling of control cells or the A549 cells in the presence or absence of acetate following TGF-β1 stimulation

Project description:Purpose: To compare the transcriptome profiling of control cells or the A549 cells in the presence or absence of acetate following TGF-β1 stimulation. Methods: A549 cells were treated with control, TGF-β1 or TGF-β1 plus acetate for 2 days. And then, we performed RNA sequencing for transcription profiling of control cells or the A549 cells in the presence or absence of acetate following TGF-β1 stimulation. The raw data were processed with bcl2fastq software and HISAT2. Results: From the transcriptome profiling and analysis, we got gene expression data of control group and in the presence or absence of acetate following TGF-β1 stimulation using A549 cells. Conclusion: The gene expression data revealed the transcriptome variation by TGF-β1 treatment and acetate can reverse TGF-β1 effect.

2022-06-14 | GSE197132 | GEO

Transcriptome profiling of mouse CD8+ T cells in the presence or absence of acetate

Project description:Transcriptome profiling of mouse CD8+ T cells in the presence or absence of acetate

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CD4+ T cells in presence or absence of Ikaros

Project description:CD4+ T cells in presence or absence of Ikaros

| PRJNA662885 | ENA

Transcriptome profiling of mouse CD8+ T cells in the presence or absence of acetate

Project description:To investigate the role of acetate in T cell survival and the underlying mechanism, transcription profiling was performed on mouse CD8+ T cells treated with or without 10mM acetate for 24h. We then performed gene expression profiling analysis using data obtained from RNA-seq of mouse CD8+ T cells.

2023-06-22 | GSE217411 | GEO

Next-generation RNA sequencing of Acetate treated primary cultured mouse astrocytes in the presence or absence of Aβ

Project description:Reactive astrogliosis is a well-known and recognised marker of Alzheimer's Disease (AD). The aim of this study is to functionally visualise reactive astrocyte-mediated neuronal hypometabolism in the brains that is associated with AD and neuroinflammation. To investigate alterations of acetate and glucose metabolism and the effect thereof in AD-like astrocytes, primary astrocyte cultures were treated with acetate in the presence or absence of amyloid beta (Aβ) oligomers. On comparison, we found that acetate treatment upregulated the expression of acetate transporter MCT1 (Slc16a1) as well as that of enzymes involved in the urea cycle and subsequent GABA synthesis. We could, therefore, conclude that MCT1-mediated uptake of acetate into astrocytes triggered GABA synthesis by upregulating enzymes involved in putrescine production and degradation.

2023-04-03 | GSE228468 | GEO

Transcriptome profiling of control cells or the A549 cells in the presence or absence of acetate following TGF-β1 stimulation

Project description:Transcriptome profiling of control cells or the A549 cells in the presence or absence of acetate following TGF-β1 stimulation

| PRJNA809029 | ENA

RNA-SEQ analysis of CD4+ T cells in presence or absence of Ikaros.

Project description:RNA-SEQ analysis of CD4+ T cells in presence or absence of Ikaros.

| PRJNA662891 | ENA

Next-generation RNA sequencing of Acetate treated primary cultured mouse astrocytes in the presence or absence of Aβ

Project description:Next-generation RNA sequencing of Acetate treated primary cultured mouse astrocytes in the presence or absence of Aβ

| PRJNA949988 | ENA

Expression data from CD4+ Naïve T cells under Treg-inducing condition in the presence or absence of butyrate

Project description:Commensal bacteria shapes gut immune system. Colonization bacteria increase the frequency of regulatory T cells, however, the molecular mechanisms has not yet been unknown. To reveal the mechanism, we isolated Naïve CD4+ T cells from spleen of C57BL/6 mice and cultured the cells under Treg-inducing condition culture in the presence or absence of butyrate, a metabolite produced by commensal bacteria.

2013-11-20 | GSE49619 | GEO

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