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Circular RNA hsa_circ_0064559 is identified to affect the progression of colorectal cancer [PrimeView]

ABSTRACT: Circular RNA hsa_circ_0064559 is identified to affect the progression of colorectal cancer [PrimeView]

PROVIDER: PRJNA940427 | ENA |

REPOSITORIES: ENA

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Circular RNA hsa_circ_0064559 is identified to affect the progression of colorectal cancer [PrimeView]

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Circular RNA hsa_circ_0064559 is identified to affect the progression of colorectal cancer

Project description:In the present study, six pairs of matched CRC and normal colorectal tissue samples were searched for genes that may influence proliferation. Affymetrix Clariom D array research revealed 13 genes that may be engaged in the progression of CRC.

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Project description:Extrachromosomal circular DNA (eccDNA) is double-stranded circular DNA that is derived from but independent of chromosomal DNA. Owing to its nonchromosomal inheritance, eccDNA facilitates the amplification of oncogenes and expedites the process of genome evolution in tumor. However, the role of eccDNA in RB remains enigmatic. We combined Circle-Seq and RNA-Seq to identified crucial extrachromosomal circular oncogene amplicons. Herein, we revealed that extrachromosomal circular SUZ12 amplicon regulates H3K27me3 modification during the oncogenic progression of retinoblastoma. Conclusively, our study initially delineated an integrated picture of the eccDNA landscape in retinoblastoma and unveiled a novel SUZ12-containing eccDNA/H3K27me3 oncogenic mechanism where eccDNA dictates retinoblastoma progression through regulating transcription levels of linear DNA.

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Expression data from PrimeView human gene expression array

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