Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Alviniconcha marisindica

ABSTRACT: Alviniconcha marisindica mitochondrial genome raw sequence reads

PROVIDER: PRJNA947739 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR23970365_1.fastq.gz	Fastqsanger.gz
	SRR23970365_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 2 of 2

Similar Datasets

Alviniconcha sp.

Project description:The sequencing data and assembly of two Alviniconcha snails (Alviniconcha adamantis and Alviniocncha marisindica)

| PRJNA1155277 | ENA

Alviniconcha strummeri

Project description:Alviniconcha strummeri overview

| PRJNA1036350 | ENA

Alviniconcha

Project description:Gill transcriptomes from Alviniconcha species and their bacterial symbionts

| PRJNA526236 | ENA

Morus alba Raw protein sequence reads

Project description:Morus alba L. Raw protein sequence reads and sequence

2024-02-08 | PXD049451 |

Alviniconcha hessleri

Project description:Metagenomic analyses of Alviniconcha hessleri symbionts from the Mariana Back-Arc

| PRJNA763533 | ENA

Project description:16S rRNA amplicon sequencing in Alviniconcha marisindica

| PRJNA767887 | ENA

Alviniconcha kojimai

Project description:COI and ddRADseq dataset for the hydrothermal vent gastropod Alviniconcha boucheti, A. strummeri & A. kojimai

| PRJNA768636 | ENA

Alviniconcha and Ifremeria nautilei snails and their bacterial symbionts

Project description:Alviniconcha and Ifremeria metagenomics

| PRJNA523619 | ENA

Project description:Amplicon sequencing of gill-associated bacteria of Alviniconcha aff. marisindica

| PRJNA903468 | ENA

Quantitative profiling of differentially expressed miRNAs in siCTL- and siOASL-transfected HUVECs

Project description:Purpose: The goal of this study is to compare endothelial small RNA transcriptome to identify the target of OASL under basal or stimulated conditions by utilizing miRNA-seq. Methods: Endothelial miRNA profilies of siCTL or siOASL transfected HUVECs were generated by illumina sequencing method, in duplicate. After sequencing, the raw sequence reads are filtered based on quality. The adapter sequences are also trimmed off the raw sequence reads. rRNA removed reads are sequentially aligned to reference genome (GRCh38) and miRNA prediction is performed by miRDeep2. Results: We identified known miRNA in species (miRDeep2) in the HUVECs transfected with siCTL or siOASL. The expression profile of mature miRNA is used to analyze differentially expressed miRNA(DE miRNA). Conclusions: Our study represents the first analysis of endothelial miRNA profiles affected by OASL knockdown with biologic replicates.

2022-09-06 | GSE186354 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data