Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

WT distal colon RNA-seq

ABSTRACT: WT distal colon RNA-seq

PROVIDER: PRJNA952601 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR24085222_1.fastq.gz	Fastqsanger.gz
	SRR24085222_2.fastq.gz	Fastqsanger.gz
	SRR24085223_1.fastq.gz	Fastqsanger.gz
	SRR24085223_2.fastq.gz	Fastqsanger.gz
	SRR24085224_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 6

Similar Datasets

WT distal colon RNA-seq

Project description:To perform RNA-seq of distal colon tissue from WT mouse obtained from Jackson Laboratories

2023-08-01 | GSE229027 | GEO

Expression data from distal colon tissues of WT and Gm31629-/- mice

Project description:Mucosal healing is a key treatment goal for inflammatory bowel disease, and epithelial regeneration is required for an intact gut epithelium. Long noncoding RNAs are involved in the development of inflammatory bowel disease. Here, we investigated the role of a novel long noncoding RNA, Gm31629, in epithelial regeneration. We used RNA-seq to to detail the global programme of gene expression in distal colon tissues from WT and Gm31629-/-.

2021-12-31 | GSE168612 | GEO

Expression data from distal colon tissues of WT and Gm31629-/- mice

Project description:Expression data from distal colon tissues of WT and Gm31629-/- mice

| PRJNA713008 | ENA

Fish Oil distal colon from rats

Project description:Fish Oil distal colon from rats.

2017-06-05 | ST000776 | MetabolomicsWorkbench

Aldosterone regulated genes in distal colon surface cells

Project description:Effects of aldosterone on the transcriptome in distal colon. Expression of genes was studied in distal colon surface cells from aldosterone treated vs. vehicle treated rats.

2014-09-01 | E-GEOD-50533 | biostudies-arrayexpress

Aldosterone regulated genes in distal colon surface cells

Project description:Effects of aldosterone on the transcriptome in distal colon.

2014-09-01 | GSE50533 | GEO

RNA-Seq Analysis

Project description:RNA-Seq analysis carried out in three different backcrosses based on Iberian breed with Landrace, Pietrain and Duroc breeds

2017-10-31 | PRJEB23068 | EVA

RNA-seq WT and nhp6ab

Project description:RNA-seq WT and nhp6ab

| PRJNA422957 | ENA

MiRNA expression data of distal colon mucosa from young and old mice

Project description:The disruption of the mucosal barrier of the digestive tract is a common pathological change in the elderly, which often causes inflammatory bowel disease among old people.Given that microRNA (miRNA) molecules are dysregulated in many diseases, the miRNA expression in young and old normal distal colon mucosa in mice was determined by high-throughput analysis. Three 2-month-old mice and 3 24-month-old were enrolled in this study. We used sequencing analysis to identify miRNA expression in the distal colon mucosa.

2021-05-26 | GSE175493 | GEO

Gene expression profiling of proximal versus distal mouse colon during AOM/DSS-induced colitis-associated carcinogenesis.

Project description:In humans with UC, low-grade dysplasia also develops predominantly in the distal colon, progresses more rapidly to neoplasia than proximal colon low-grade dysplasia and associates with worse patient prognosis. In a mouse model of colitis-associated carcinogenesis induced by administration of the mutagen AOM and the luminal toxin DSS, tumors also develop exclusively in the distal part of the large intestine. We monitored global changes in the transcriptome of mouse proximal and distal colon during exposure to AOM/DSS with the aim to define biological pathways and processes that characterize regional responses of the large intestine to colitis-associated carcinogenesis.

2015-06-01 | GSE64658 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data