Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ScRNAseq in a panel of neuroblasoma cell lines

ABSTRACT: scRNAseq in a panel of neuroblasoma cell lines

PROVIDER: PRJNA953425 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Similar Datasets

scRNAseq in a panel of neuroblasoma cell lines

Project description:The similarity of preclinical models to human neuroblastoma tumors was evaluated with scRNAseq. The 13 NB cell lines represent a cross section of disease risk, clinical subtypes, genomic alterations, and disease phenotypes.

2023-04-10 | GSE229224 | GEO

Protein profile in a panel of HEK293A cell lines with genetic deletion

Project description:MS Analysis of genetic KO in a panel of HEK293A cell lines with genetic deletion

2023-03-04 | PXD030368 | Pride

Targeted RNA Sequencing of a panel of ovarian cancer cell lines

Project description:Assess the baseline expression of the genes in the Oncology Biomarker Panel across the panel of ovarian and cervical cancer cell lines. This data will then be compared to the sensitivity of the cell lines to DDR inhibitors. The expression data will be correlated with the sensitivity of the cell lines to see whether determinants of sensitivity described in the literature translate. A hierarchy of genes will be determined. It is expected that the cells that are more sensitive to DDR inhibitors will have decreased expression of the genes known to be determinants of sensitivity.

2020-05-21 | GSE150942 | GEO

RNA-Seq of a panel of human lymphoma cell lines (B cells)

Project description:We invastigated the baseline transcriptomic profiles of a panel of B-cell lymphoma cell lines

2023-05-10 | GSE221770 | GEO

CTCF ChIP-Seq in a panel of 18 cell lines related to ovarian cancer

Project description:CTCF ChIP-Seq was generated in a panel of 18 ovarian cancer cell lines to identify active regulatory elements in the genome.

2024-03-26 | GSE261931 | GEO

Targeted RNA Sequencing of a panel of ovarian cancer cell lines

Project description:Targeted RNA Sequencing of a panel of ovarian cancer cell lines

| PRJNA634124 | ENA

The LL-100 panel: 100 DSMZ cell lines for blood cancer studies; WES

Project description:For many years, immortalized cell lines have been used as model systems for cancer research. Cell line panels were established for basic research and drug development, but did not cover the full spectrum of leukemia and lymphoma. Therefore, we now developed a novel panel (LL-100), 100 cell lines covering 22 entities of human leukemia and lymphoma including T-cell, B-cell and myeloid malignancies. Importantly, all cell lines are unequivocally authenticated and assigned to the correct tissue. Cell line samples were proven to be free of mycoplasma and virus contamination. Whole exome sequencing (WES) and RNA sequencing (RNA-seq) of the hundred authenticated leukemia-lymphoma cell lines were conducted with a uniform methodology to complement existing data on these publicly available cell lines. This part captures WES. This data set will be useful for understanding the function of oncogenes and tumor suppressor genes and to develop targeted therapies.

2019-05-28 | E-MTAB-7722 | biostudies-arrayexpress

Transcriptional response to TNF-alpha in a panel of 17 human melanoma cell lines

2014-02-10 | GSE51221 | GEO

Transcriptional response to TNF-alpha in a panel of 17 human melanoma cell lines

Project description:A panel of 17 human melanoma cell lines with known BRAF and NRAS mutation status was stimulated with TNF-alpha for 72 hours. The goal of the study was to correlate the transcriptional response in BRAF versus NRAS mutated melanoma cell lines. Total RNA was obtained from a panel of 17 human melanoma cell lines treated for 72 hours with TNF-alpha or left untreated. Gene expression profiling was done using the Illumina Human HT12 v4 platform.

2014-02-10 | E-GEOD-51221 | biostudies-arrayexpress

RNA-seq of a panel of human normal and cancer cell lines

Project description:RNA-seq of a panel of human normal and cancer cell lines

| PRJEB56500 | ENA