Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Dental plaque

ABSTRACT: Metagenomics reveals dental plaque in patients

PROVIDER: PRJNA956492 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR24197326_1.fastq.gz	Fastqsanger.gz
	SRR24197326_2.fastq.gz	Fastqsanger.gz
	SRR24197327_1.fastq.gz	Fastqsanger.gz
	SRR24197327_2.fastq.gz	Fastqsanger.gz
	SRR24197328_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 18

Similar Datasets

Dental plaque

Project description:Dental plaque Genome sequencing

| PRJNA890880 | ENA

Dental Plaque

Project description:Dental Plaque Targeted loci environmental

| PRJNA589851 | ENA

dental plaque

Project description:Metatranscriptomics studies on dental plaque

| PRJEB7590 | ENA

dental plaque

Project description:Phageome in dental plaque of periodontitis

| PRJNA1150728 | ENA

Transcriptome Analysis of Human Supragingival Dental Plaque Microbiome from 19 Twin Pairs with and without Dental Caries

Project description:The study aims to assess gene expression in plaque samples collected from twin pairs that are both concordant and discordant with respect to dental Caries diagnosis. File Naming Conventions are as follows: Patient ID : 4 digit identifier Diagnosis : Caries Negative(CN) or Caries Positive(CP) Type of Twin: Monozygotic(MZ)or Dizygotic(DZ) Pair to xxxx: 4 digit twin identifier maps to the Patient ID E.g: 2126_CP_MZ_PairTo_2125_fastqc - 2126 is a caries positive patient and pairs to monozygotic twin pair 2125. Plaque samples from twin pairs that are both concordant and discordant with respect to dental Caries diagnosis are enriched for bacterial messenger RNA to study the gene expression differences in the samples. RNA was extracted from RNAprotect (Qiagen, In c.) treated dental plaque scrapings from 38 patients. Amplified cDNA was created and rRNA sequence was removed by subtractive hybridization. Individual patient samples were run on a single lane of an Illumina Genome Analyzer.

2011-09-26 | E-GEOD-31439 | biostudies-arrayexpress

Dental Plaque Microbiome

Project description:Dental Plaque Microbiome Targeted loci environmental

| PRJNA844221 | ENA

oral dental plaque bacterium

Project description:Oral dental plaque bacterium Raw sequence reads

| PRJNA1063865 | ENA

Transcriptome Analysis of Human Supragingival Dental Plaque Microbiome from 19 Twin Pairs with and without Dental Caries

2011-09-26 | GSE31439 | GEO