Project description:We isolated an efficient doxycycline degrading strain Chryseobacterium sp. WX1. To investigate gene expression patterns during doxycyclinedegradation by strain WX1, we conducted a comparative transcriptomic analysis using cultures of strain WX1 with and without doxycycline addition. The RNA-Seq data revealed that 90.44-96.56% of the reads mapped to the genome of Chryseobacterium sp. WX1 across all samples. Differentially expressed genes (DEGs) analysis (|log2FC| >2; p < 0.01) showed that 693 genes were significantly up-regulated and 592 genes were significantly down-regulated.

2023-09-12 | GSE242785 | GEO

Pseudomonas psychrotolerans strain:SORGH_AS 227

Project description:Pseudomonas psychrotolerans SORGH_AS 227 genome sequencing

| PRJNA995638 | ENA

Klebsiella variicola strain:SORGH_AS 842

Project description:Klebsiella variicola SORGH_AS 842 genome sequencing

| PRJNA957354 | ENA

Acinetobacter baylyi strain:SORGH_AS 887

Project description:Acinetobacter baylyi SORGH_AS 887 genome sequencing

| PRJNA957358 | ENA

Sphingobacterium zeae strain:SORGH_AS 892

Project description:Sphingobacterium zeae SORGH_AS 892 genome sequencing