Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Tumor and immune cell types interact to produce heterogeneous phenotypes of pediatric high grade glioma [bulkRNA-seq]

ABSTRACT: Tumor and immune cell types interact to produce heterogeneous phenotypes of pediatric high grade glioma [bulkRNA-seq]

PROVIDER: PRJNA968166 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR24460451_1.fastq.gz	Fastqsanger.gz
	SRR24460451_2.fastq.gz	Fastqsanger.gz
	SRR24460452_1.fastq.gz	Fastqsanger.gz
	SRR24460452_2.fastq.gz	Fastqsanger.gz
	SRR24460453_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 40

Similar Datasets

Tumor and immune cell types interact to produce heterogeneous phenotypes of pediatric high grade glioma

Project description:Tumor and immune cell types interact to produce heterogeneous phenotypes of pediatric high grade glioma

| PRJNA968164 | ENA

Tumor and immune cell types interact to produce heterogeneous phenotypes of pediatric high grade glioma [scRNA-seq]

Project description:Tumor and immune cell types interact to produce heterogeneous phenotypes of pediatric high grade glioma [scRNA-seq]

| PRJNA968165 | ENA

Tumor and immune cell types interact to produce heterogeneous phenotypes of pediatric high grade glioma [bulkRNA-seq]

Project description:Bulk RNA-Seq of pediatric high-grade glioma patient samples

2023-11-03 | GSE231858 | GEO

Tumor and immune cell types interact to produce heterogeneous phenotypes of pediatric high grade glioma [scRNA-seq]

Project description:Single-cell RNA-Seq was conducted on 19 pediatric high-grade glioma patient samples to study tumor heterogeneity and tumor/immune cell interaction.

2023-11-03 | GSE231859 | GEO

Tumor and immune cell types interact to produce heterogeneous phenotypes of pediatric high grade glioma

Project description:This SuperSeries is composed of the SubSeries listed below.

2023-11-03 | GSE231860 | GEO

Fresh Produce

Project description:Plasmids from Fresh Produce

| PRJNA954576 | ENA

Tsc2 coordinates differentiation [bulkRNA-seq]

Project description:Tsc2 coordinates differentiation [bulkRNA-seq]

| PRJNA954865 | ENA

caArray_hanas-00078: Distinctive molecular profiles of high-grade and low-grade gliomas based on oligonucleotide microarray analysis

Project description:Astrocytomas are heterogeneous intracranial glial neoplasms ranging from the highly aggressive malignant glioblastoma multiforme (GBM) to the indolent, low-grade pilocytic astrocytoma. We have investigated whether DNA microarrays can identify gene expression differences between high-grade and low-grade glial tumors. We compared the transcriptional profile of 45 astrocytic tumors including 21 GBMs and 19 pilocytic astrocytomas using oligonucleotide-based microarrays. Of the approximately 6800 genes that were analyzed, a set of 360 genes provided a molecular signature that distinguished between GBMs and pilocytic astrocytomas. Many transcripts that were increased in GBM were not previously associated with gliomas and were found to encode proteins with properties that suggest their involvement in cell proliferation or cell migration. Microarray-based data for a subset of genes was validated using real-time quantitative reverse transcription-PCR. Immunohistochemical analysis also localized the protein products of specific genes of interest to the neoplastic cells of high-grade astrocytomas. Our study has identified a large number of novel genes with distinct expression patterns in high-grade and low-grade gliomas. hanas-00078 Assay Type: Gene Expression Provider: Affymetrix Array Designs: Hu6800 Organism: Homo sapiens (ncbitax) Tissue Sites: Brain Material Types: synthetic_DNA, synthetic_RNA, organism_part Disease States: Primary Glioma, Normal

2015-06-25 | E-GEOD-70231 | biostudies-arrayexpress

caArray_hanas-00078: Distinctive molecular profiles of high-grade and low-grade gliomas based on oligonucleotide microarray analysis

2015-06-25 | GSE70231 | GEO

Diverse epigenetic strategies interact to control epidermal differentiation

Project description:This SuperSeries is composed of the following subset Series: GSE34556: Diverse epigenetic strategies interact to control epidermal differentiation [ChIP-Seq] GSE34557: Diverse epigenetic strategies interact to control epidermal differentiation [Illumina bead array] Refer to individual Series

2012-06-23 | E-GEOD-34558 | biostudies-arrayexpress

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data