Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Little Sippewissett Salt Marsh Sediment Microbial Communities

ABSTRACT: Microbial Communities of Little Sippewissett Salt Marsh Sediment

PROVIDER: PRJNA973662 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR24837639_1.fastq.gz	Fastqsanger.gz
	SRR24837639_2.fastq.gz	Fastqsanger.gz
	SRR24837640_1.fastq.gz	Fastqsanger.gz
	SRR24837640_2.fastq.gz	Fastqsanger.gz
	SRR24837641_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 120

Similar Datasets

Little Sippewissett Marsh sediment cores

Project description:Little Sippewissett Marsh sediment cores Targeted loci environmental

| PRJNA1088085 | ENA

Little Sippewissett Salt Marsh Sediment

Project description:16S rRNA gene amplicon sequences from incubations of shallow (0-3 cm) sediment collected from Little Sippewissett Salt Marsh in Cape Cod, MA, USA

| PRJNA1188625 | ENA

salt marsh metagenome

Project description:Sippewissett Salt Marsh tide pool sediment Targeted Locus (Loci)

| PRJNA251325 | ENA

Community composition of nitrous oxide related genes and their relationship to nitrogen cycling rates in salt marsh sediments

Project description:Salt marshes provide many key ecosystem services that have tremendous ecological and economic value. One critical service is the removal of fixed nitrogen from coastal waters, which limits the negative effects of eutrophication resulting from increased nutrient supply. Nutrient enrichment of salt marsh sediments results in higher rates of nitrogen cycling and, commonly, a concurrent increase in the flux of nitrous oxide, an important greenhouse gas. Little is known, however, regarding controls on the microbial communities that contribute to nitrous oxide fluxes in marsh sediments. To address this disconnect, we generated microbial community profiles as well as directly assayed nitrogen cycling genes that encode the enzymes responsible for overall nitrous oxide flux from salt marsh sediments. We hypothesized that communities of microbes responsible for nitrogen transformations will be structured by nitrogen availability. Taxa that respond positively to high nitrogen inputs may be responsible for the elevated rates of nitrogen cycling processes measured in fertilized sediments. Our data show that, with the exception of ammonia-oxidizing archaea, the community composition of organisms responsible for production and consumption of nitrous oxide was altered under nutrient enrichment. These results suggest that elevated rates of nitrous oxide production and consumption are the result of changes in community structure, not simply changes in microbial activity.

2018-01-13 | GSE108888 | GEO

Lignocellulose associated salt marsh microbiome time series metasecretome

Project description:Time series metasecretomes (weeks 1, 3, 5 and ten) of lignocellulose responsive microbiomes enriching on Spartina anglica biomass for 16 weeks in a natural UK salt marsh (Welwick, Humber estuary).

2019-05-29 | MSV000083872 | MassIVE

salt marsh metagenome

Project description:salt marsh metagenome Raw sequence reads

| PRJNA602740 | ENA

Salt marsh metatranscriptome

Project description:Salt marsh metatranscriptome raw sequence reads

| PRJNA950121 | ENA

Salt Marsh Sediments

Project description:Salt Marsh Sediments Raw sequence reads

| PRJNA423244 | ENA

Salt marsh metagenome

Project description:Salt marsh metagenome Raw sequence reads