Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Population genomics of invertebrates for conservation

PROVIDER: PRJNA973723 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR24638100_1.fastq.gz	Fastqsanger.gz
	SRR24638100_2.fastq.gz	Fastqsanger.gz
	SRR24638101_1.fastq.gz	Fastqsanger.gz
	SRR24638101_2.fastq.gz	Fastqsanger.gz
	SRR24638102_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 206

Similar Datasets

SwissBeeGen

Project description:Swiss honey bee population and conservation genomics

| PRJEB16533 | ENA

Project description:Population genomics of deep-sea invertebrates from U.S. Atlantic Margin

| PRJNA769076 | ENA

Conservation genomics of Atlantic salmon

Project description:This SuperSeries is composed of the following subset Series: GSE19111: Conservation genomics of Atlantic salmon (Year One) GSE19119: Conservation genomics of Atlantic salmon (Year Two) Refer to individual Series

2010-05-19 | E-GEOD-19170 | biostudies-arrayexpress

Project description:carri conservation genomics - Desmognathus

| PRJNA743148 | ENA

Project description:conservation genomics of Cycas

| PRJNA737036 | ENA

Effect of diet and association with fertility outcomes in semen proteome and transcriptome from wild and captive Black-footed ferrets

Project description:The black-footed ferret (Mustela nigripes) is a star example of the efforts of conservation programs in bringing endangered species back from the brink of extinction. As one of the world’s most endangered mammals, the vast majority of black-footed ferrets living in the wild today are the offspring of a founding captive population. The success of this ongoing breeding program, however, is threatened by inbreeding depression and the observed decline in pregnancy rates since its founding. As the wild and modern captive populations share a genetic history, the greatest difference between the two groups is the captive environment of the breeding program. In this study, we used RNA sequencing and proteomics for the first time in black-footed ferrets to explore whether the diet of wild ferrets versus captive diet variants could explain the differences in fertility and sperm characteristics observed between each population. We find that changes in both the transcriptional and proteomic profile of black-footed ferret ejaculate are strongly associated with differences in fertility, especially in pathways associated with innate immunity and metabolism; that transcriptional changes are further exacerbated by diet. Overall, our results support the hypothesis of ongoing environmental-dependent inbreeding depression in the black-footed ferret, with a need to re-evaluate dietary and environmental parameters of the conservation program; and also illustrates the value of multi-level genomics for conservation management programs.

2023-09-20 | PXD044152 | Pride

Project description:Phylogeny, population structure, and conservation genomics of Galapagos vermilion flycatchers (genus Pyrocephalus)

| PRJNA1064398 | ENA

Project description:Conservation genomics of Cupressus chengiana

| PRJNA556937 | ENA

Tricyrtis

Project description:Conservation genomics of Tricyrtis formosana

| PRJDB15490 | ENA

Monitoring genome-wide diversity over contemporary time with new indicators applied to Arctic charr populations

Project description:Conservation genomics of Arctic charr

| PRJEB62707 | ENA