Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Rectal microbiological fecal samples from DeZhou donkeys

ABSTRACT: Rectal microbiological fecal samples from DeZhou donkeys Raw sequence reads

PROVIDER: PRJNA977427 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR24806250_1.fastq.gz	Fastqsanger.gz
	SRR24806250_2.fastq.gz	Fastqsanger.gz
	SRR24806251_1.fastq.gz	Fastqsanger.gz
	SRR24806251_2.fastq.gz	Fastqsanger.gz
	SRR24806252_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 36

Similar Datasets

Reactor microbiological samples

Project description:Reactor microbiological samples Raw sequence reads

| PRJNA1023042 | ENA

Rectal microbial fecal sample from a Texas donkey

Project description:Rectal microbial fecal sample from a Texas donkey Raw sequence reads

| PRJNA977424 | ENA

gut metagenome cultivar:Dezhou

Project description:gut metagenome cultivar:Dezhou Metagenome

| PRJNA556043 | ENA

Fecal microbiota transplant rescues mice from sepsis

Project description:The aim of this study was to test the hypothesis that replenishing the microbiota with a fecal microbiota transplant (FMT) can rescue a host from an advanced stage of sepsis. We developed a clinically-relevant mouse model of lethal polymicrobial gut-derived sepsis in mice using a 4-member pathogen community (Candida albicans, Klebsiella oxytoca, Serratia marcescens, Enterococcus faecalis) isolated from a critically ill patient. In order to mimic pre-operative surgical patient condition mice were exposed to food restriction and antibiotics. Approximately 18 hours prior to surgery food was removed from the cages and the mice were allowed only tap water. Each mouse received an intramuscular Cefoxitin injection 30 minutes prior to the incision at a concentration of 25 mg/kg into the left thigh. Mice were then subjected to a midline laparotomy, 30% hepatectomy of the left lateral lobe of the liver and a direct cecal inoculation of 200 µL of the four pathogen community. On postoperative day one, the mice were administered rectal enema. Mice were given either 1 ml of fecal microbiota transplant (FMT) or an autoclaved control (AC). This was again repeated on postoperative day two. Mice were then followed for mortality. Chow was restored to the cages on postoperative day two, approximately 45 hours after the operation. The injection of fecal microbiota transplant by enema significantly protected mice survival, reversed the composition of gut microflora and down-regulated the host inflammatory response. The cecum, left lobe of the liver, and spleen were isolated from mice for microarray processing with three or more replicates for six expermental conditions: non-treated control, SAHC POD1, SAHC.AC POD2, SAHC.FMT POD2, SAHC.AC POD7, SAHC.FMT POD7

2015-07-30 | E-GEOD-71530 | biostudies-arrayexpress

Fecal samples

Project description:Fecal samples Metagenome

| PRJNA730197 | ENA

Human rectal adenoma (8 cases) vs. rectal carcinoma (8 cases)

Project description:Genomic profiling of human rectal adenoma and carcinoma by array-based comparative genomic hybridization Two group experiment, rectal adenoma vs. rectal carcinoma. Biological replicates: 8 adenomas vs. 8 carcinomas

2011-12-20 | E-GEOD-34472 | biostudies-arrayexpress

Fecal microbiota transplant rescues mice from sepsis

2015-07-30 | GSE71530 | GEO

Fecal samples

Project description:TD Fecal samples Metagenome

| PRJNA633337 | ENA

Kinase activity profiling of human locally advanced rectal cancer samples

Project description:Locally advanced rectal cancer characterized by multiplex kinase activity profiling

2010-08-05 | E-TABM-913 | biostudies-arrayexpress

Equus asinus breed:Dezhou

Project description:Equus asinus breed:Dezhou Transcriptome or Gene expression

| PRJNA498810 | ENA