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Malaria-specific Type 1 Regulatory T cells are more abundant in first pregnancies and associated with placental malaria [Whole Blood RNA-seq]

ABSTRACT: Malaria-specific Type 1 Regulatory T cells are more abundant in first pregnancies and associated with placental malaria [Whole Blood RNA-seq]

PROVIDER: PRJNA982094 | ENA |

REPOSITORIES: ENA

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			Action	DRS
	SRR24885565_1.fastq.gz	Fastqsanger.gz
	SRR24885565_2.fastq.gz	Fastqsanger.gz
	SRR24885566_1.fastq.gz	Fastqsanger.gz
	SRR24885566_2.fastq.gz	Fastqsanger.gz
	SRR24885567_1.fastq.gz	Fastqsanger.gz

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Project description:BackgroundMalaria in pregnancy (MIP) causes higher morbidity in primigravid compared to multigravid women; however, the correlates and mechanisms underlying this gravidity-dependent protection remain incompletely understood. We aimed to compare the cellular immune response between primigravid and multigravid women living in a malaria-endemic region and assess for correlates of protection against MIP.MethodsWe characterised the second trimester cellular immune response among 203 primigravid and multigravid pregnant women enrolled in two clinical trials of chemoprevention in eastern Uganda, utilizing RNA sequencing, flow cytometry, and functional assays. We compared responses across gravidity and determined associations with parasitaemia during pregnancy and placental malaria.FindingsUsing whole blood RNA sequencing, no significant differentially expressed genes were identified between primigravid (n = 12) and multigravid (n = 11) women overall (log 2(FC) > 2, FDR < 0.1). However, primigravid (n = 49) women had higher percentages of malaria-specific, non-naïve CD4+ T cells that co-expressed IL-10 and IFNγ compared with multigravid (n = 85) women (p = 0.000023), and higher percentages of these CD4+ T cells were associated with greater risks of parasitaemia in pregnancy (Rs = 0.49, p = 0.001) and placental malaria (p = 0.0073). These IL-10 and IFNγ co-producing CD4+ T cells had a genomic signature of Tr1 cells, including expression of transcription factors cMAF and BATF and cell surface makers CTLA4 and LAG-3.InterpretationMalaria-specific Tr1 cells were highly prevalent in primigravid Ugandan women, and their presence correlated with a higher risk of malaria in pregnancy. Understanding whether suppression of Tr1 cells plays a role in naturally acquired gravidity-dependent immunity may aid the development of new vaccines or treatments for MIP.FundingThis work was funded by NIH (PO1 HD059454, U01 AI141308, U19 AI089674, U01 AI155325, U01 AI150741), the March of Dimes (Basil O'Connor award), and the Bill and Melinda Gates Foundation (OPP 1113682).

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Malaria-specific Type 1 Regulatory T cells are more abundant in first pregnancies and associated with placental malaria [Whole Blood RNA-seq]

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