Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Multidimensional Styela plicata microbiome

PROVIDER: PRJNA982737 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR24894541_1.fastq.gz	Fastqsanger.gz
	SRR24894541_2.fastq.gz	Fastqsanger.gz
	SRR24894542_1.fastq.gz	Fastqsanger.gz
	SRR24894542_2.fastq.gz	Fastqsanger.gz
	SRR24894543_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 229

Similar Datasets

Multidimensional Styela plicata microbiome

Project description:Multidimensional Styela plicata microbiome

| PRJEB61940 | ENA

Styela plicata temporal 16S data

Project description:Styela plicata temporal 16S microbiome data

| PRJEB67520 | ENA

Styela plicata

Project description:Styela plicata overview

| PRJNA718919 | ENA

Effects of dermatan sulfate from marine invertebrates in wound healing pathway: a natural resource applied to regenerative therapy

Project description:The aim of this study was to identify the biological mechanisms involved in the effects of natural compounds such as heparin analogues obtained from marine invertebrates in wound healing We performed the obtaining, purifying and chemical characterization of the dermatan sulfate extracted from Styela plicata, an ascidian species. DS was used in wound healing in vitro assay and was analyzed for its effect in the toxicity, proliferation and cellular migration of murine fibroblasts. In addition, a gene expression test was performed to determine which genes responsible for the healing process were being modulated.

2020-11-30 | GSE160142 | GEO

Project description:Styela plicata temporal 16S data

| PRJNA1030313 | ENA

Styela plicata 2bRAD

Project description:Styela plicata 2bRAD data population genomic

| PRJEB67521 | ENA

Styela plicata WGS Pangenomes

Project description:Styela plicata (pleated sea squirt) genomic data

| PRJEB67519 | ENA

Styela plicata strain:Not applied | isolate:SP | breed:Not applied | cultivar:Styela plicata_BRRJ

Project description:Styela plicata strain:Not applied | isolate:SP | breed:Not applied | cultivar:Styela plicata_BRRJ Raw sequence reads

| PRJNA679185 | ENA

Styela plicata Reference Genome

Project description:Styela plicata (pleated sea squirt) genomic and transcriptomic data (kaStyplic1)

| PRJEB67507 | ENA

SOX2-positive retinal stem cells are identified in adult human pars plicata by single-cell transcriptomic analyses

Project description:Stem cell therapy is a promising strategy to rescue visual impairment caused by retinal degeneration. Previous studies have proposed controversial theories about whether in situ retinal stem cells (RSCs) are present in adult human eye tissue. Single-cell RNA sequencing (scRNA-seq) has emerged as one of the most powerful tools to reveal the heterogeneity of tissue cells. By using scRNA-seq, we explored the cell heterogeneity of different subregions of adult human eyes, including pars plicata, pars plana, retinal pigment epithelium (RPE), iris and neural retina (NR). We identified one subpopulation expressing SOX2 as RSCs, which were present in the pars plicata of the adult human eye. Further analysis showed the identified subpopulation of RSCs expressed specific markers AQP1 and TSPAN12. We therefore isolated this subpopulation using these two markers by flow sorting and found that the isolated RSCs could proliferate and differentiate into some retinal cell types, including photoreceptors, neurons, RPE cells, microglia, astrocytes, horizontal cells, bipolar cells and ganglion cells; whereas, AQP1- TSPAN12- cells did not have this differentiation potential. In conclusion, our results showed that SOX2-positive RSCs are present in the pars plicata and may be valuable for treating human retinal diseases due to their proliferation and differentiation potential.

2022-11-27 | GSE218638 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data