Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Oncorhynchus kisutch

ABSTRACT: Oncorhynchus kisutch Raw sequence reads

PROVIDER: PRJNA982773 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR25520100_1.fastq.gz	Fastqsanger.gz
	SRR25520100_2.fastq.gz	Fastqsanger.gz
	SRR25520101_1.fastq.gz	Fastqsanger.gz
	SRR25520101_2.fastq.gz	Fastqsanger.gz
	SRR25520102_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 32

Similar Datasets

Oncorhynchus kisutch

Project description:Oncorhynchus kisutch Raw sequence reads

| PRJNA397730 | ENA

Oncorhynchus kisutch

Project description:Oncorhynchus kisutch Raw sequence reads

| PRJNA595053 | ENA

Oncorhynchus kisutch

Project description:Oncorhynchus kisutch Raw sequence reads

| PRJNA769426 | ENA

Oncorhynchus kisutch

Project description:Oncorhynchus kisutch Transcriptome

| PRJNA186554 | ENA

Oncorhynchus kisutch

Project description:Oncorhynchus kisutch overview

| PRJNA98093 | ENA

Oncorhynchus kisutch

Project description:Oncorhynchus kisutch Transcriptome or Gene expression

| PRJNA292718 | ENA

Oncorhynchus kisutch

Project description:Oncorhynchus kisutch Transcriptome or Gene expression

| PRJNA284852 | ENA

Oncorhynchus kisutch

Project description:Sequencing the Coho salmon (Oncorhynchus kisutch) genome

| PRJNA352719 | ENA

Oncorhynchus kisutch

Project description:Comparable immune responses of Oncorhynchus kisutch to growth rate

| PRJNA595068 | ENA

RNA-Seq of liver tissue samples from northern pike (Esox lucius), coho salmon (Oncorhynchus kisutch) and Arctic charr (Salvelinus alpinus)

Project description:The aim of this sequencing experiment was to make available liver tissue expression for selected fish species, northern pike (Esox lucius, Eluc), coho salmon (Oncorhynchus kisutch, Okis) and Arctic charr (Salvelinus alpinus, Salp), for comparative expression studies between the species. Samples in replicate of four were sacrificed according to protocols at each of the facilities from where samples were obtained. RNA was extracted from samples and Illumina TruSeq Stranded mRNA libraries were built. Sequencing was performed in two passes on an Illumina HiSeq2500, paired-end 125bp reads. Processed count tables per species as raw counts, FPKM, or TPM, were generated from read alignment to the NCBI genomes of the respective species using STAR and gene level counting using RSEM and NCBI gene annotation.

2020-04-30 | E-MTAB-8962 | biostudies-arrayexpress

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data