Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Novel insights into the role of the histone variant H2A.Z in the plant pathogen Fusarium fujikuroi

ABSTRACT: Novel insights into the role of the histone variant H2A.Z in the plant pathogen Fusarium fujikuroi

PROVIDER: PRJNA996564 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR25343402.fastq.gz	Fastqsanger.gz
	SRR25343403.fastq.gz	Fastqsanger.gz
	SRR25343404.fastq.gz	Fastqsanger.gz
	SRR25343405.fastq.gz	Fastqsanger.gz
	SRR25343406.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 40

Similar Datasets

Novel insights into the role of the histone variant H2A.Z in the plant pathogen Fusarium fujikuroi [ChIP-seq]

Project description:ChIP-seq of histone PTM and H2A.Z depositioning in F. fujikuroi

2024-04-02 | GSE237763 | GEO

Novel insights into the role of the histone variant H2A.Z in the plant pathogen Fusarium fujikuroi [Mnase-seq]

Project description:Localization of nucleosomes in F. fujikuroi

2024-04-02 | GSE237764 | GEO

Nitrogen-regulated genes in Fusarium fujikuroi

Project description:Genome-wide search for AreA-dependent and -independent nitrogen-regulated genes in Fusarium fujikuroi by cross-species hybridization with F. verticillioides microarrays. Keywords: glutamine treatmet Compare expression of genes of Fusarium fujikuroi wild-type and areA mutant strains responding to nitrogen limitation or sufficiency.

2010-05-15 | E-GEOD-10692 | biostudies-arrayexpress

Novel insights into the role of the histone variant H2A.Z in the plant pathogen Fusarium fujikuroi [Mnase-seq]

Project description:Novel insights into the role of the histone variant H2A.Z in the plant pathogen Fusarium fujikuroi [Mnase-seq]

| PRJNA996568 | ENA

Novel insights into the role of the histone variant H2A.Z in the plant pathogen Fusarium fujikuroi [ChIP-seq]

Project description:Novel insights into the role of the histone variant H2A.Z in the plant pathogen Fusarium fujikuroi [ChIP-seq]

| PRJNA996567 | ENA

Novel insights into the role of the histone variant H2A.Z in the plant pathogen Fusarium fujikuroi [RNA-seq]

Project description:Novel insights into the role of the histone variant H2A.Z in the plant pathogen Fusarium fujikuroi [RNA-seq]

| PRJNA996566 | ENA

Novel insights into the role of the histone variant H2A.Z in the plant pathogen Fusarium fujikuroi [RNA-seq]

Project description:Transcriptome in respect to H2A.Z downregulation or overexpression

2024-04-02 | GSE237762 | GEO

Nitrogen-regulated genes in Fusarium fujikuroi

2008-11-21 | GSE10692 | GEO

The SAGA complex in the rice pathogen Fusarium fujikuroi: structure and functional characterization

Project description:Post-translational modification of histones is a crucial mode of transcriptional regulation in eukaryotes. A well-described acetylation modifier of certain lysine residues is the Spt-Ada-Gcn5 acetyltransferase (SAGA) complex assembled around the histone acetyltransferase Gcn5 in Saccharomyces cerevisiae. We identified and characterized the SAGA complex in the rice pathogen Fusarium fujikuroi, well-known for producing a large variety of secondary metabolites (SMs). By using a co-immunoprecipitation approach, almost all of the S. cerevisiae SAGA complex components have been identified, except for the ubiquitinating DUBm module and the chromodomain containing Chd1. Deletion of GCN5 led to impaired growth, loss of conidiation and alteration of SM biosynthesis. Furthermore, we show that in F. fujikuroi Gcn5 is essential for the acetylation of several histone 3 lysines, i.e. H3K4, H3K9, H3K18 and H3K27. A genome-wide microarray analysis revealed differential expression of about 30% of the genome with an enrichment of genes involved in primary and secondary metabolism, transport and histone modification. HPLC-based analysis of known SMs revealed significant alterations in the Δgcn5 mutant. While most SM genes were activated by Gcn5 activity, the biosynthesis of the pigment bikaverin was strongly increased upon GCN5 deletion underlining the diverse roles of the SAGA complex in F. fujikuroi. Investigation of whole genome gene expression of the Fusarium fujikuroi wild type IMI58289 and the Δgcn5 mutant under nitrogen starvation and nitrogen sufficient conditions.

2017-04-01 | GSE80118 | GEO

Fusarium fujikuroi

Project description:Nitrogen-regulated genes in Fusarium fujikuroi

| PRJNA107563 | ENA