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TranscriptomicsAn integrative genomics approach to explore diversity of light harvesting antenna complexes from environmental isolates of the purple non-sulfur bacterium Rhodopseudomonas palustris
Peripheral light harvesting (LH) antenna complexes have been studied extensively in the purple nonsulfur bacterium Rhodopseudomonas palustris because it produces different types of LH complexes under high light intensities (LH2 complex) and low light intensities (LH3 and LH4 complex). The ability o...
ORGANISM(S): Rhodopseudomonas palustris 
2015-03-01 | E-GEOD-59544 | biostudies-arrayexpress
TranscriptomicsThe activity of Rhodopseudomonas palustris p-coumaroyl-homoserine lactone-responsive transcription factor RpaR
The Rhodopseudomonas palustris transcriptional regulator RpaR responds to the RpaI-synthesized quorum-sensing signal p-coumaroyl-homoserine lactone (pC-HSL). Other characterized RpaR homologs respond to fatty acyl-HSLs. We show here that RpaR functions as a transcriptional activator, which binds dir...
ORGANISM(S): Rhodopseudomonas palustris 
2011-05-15 | E-GEOD-27365 | biostudies-arrayexpress
TranscriptomicsIdentification of a p-coumarate degradation regulon in Rhodopseudomonas palustris using Xpression, an integrated tool for prokaryotic RNA-seq data processing
High-throughput sequencing of cDNA prepared from RNA, an approach known as RNA-seq, is coming into increasing use as a method for transcriptome analysis. Despite its many advantages, widespread adoption of the technique has been hampered by a lack of easy-to-use, integrated, open source tools for an...
ORGANISM(S): Rhodopseudomonas palustris CGA009 
2012-09-01 | E-GEOD-39025 | biostudies-arrayexpress
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