<HashMap><database>biostudies-literature</database><scores/><additional><submitter>Liu Z</submitter><funding>National Natural Science Foundation of China</funding><pagination>816</pagination><full_dataset_link>https://www.ebi.ac.uk/biostudies/studies/S-EPMC8831564</full_dataset_link><repository>biostudies-literature</repository><omics_type>Unknown</omics_type><volume>13(1)</volume><pubmed_abstract>Long noncoding RNAs (lncRNAs) are recently implicated in modifying immunology in colorectal cancer (CRC). Nevertheless, the clinical significance of immune-related lncRNAs remains largely unexplored. In this study, we develope a machine learning-based integrative procedure for constructing a consensus immune-related lncRNA signature (IRLS). IRLS is an independent risk factor for overall survival and displays stable and powerful performance, but only demonstrates limited predictive value for relapse-free survival. Additionally, IRLS possesses distinctly superior accuracy than traditional clinical variables, molecular features, and 109 published signatures. Besides, the high-risk group is sensitive to fluorouracil-based adjuvant chemotherapy, while the low-risk group benefits more from bevacizumab. Notably, the low-risk group displays abundant lymphocyte infiltration, high expression of CD8A and PD-L1, and a response to pembrolizumab. Taken together, IRLS could serve as a robust and promising tool to improve clinical outcomes for individual CRC patients.</pubmed_abstract><journal>Nature communications</journal><pubmed_title>Machine learning-based integration develops an immune-derived lncRNA signature for improving outcomes in colorectal cancer.</pubmed_title><pmcid>PMC8831564</pmcid><funding_grant_id>81972663</funding_grant_id><pubmed_authors>Liu Z</pubmed_authors><pubmed_authors>Weng S</pubmed_authors><pubmed_authors>Liu L</pubmed_authors><pubmed_authors>Dang Q</pubmed_authors><pubmed_authors>Zhang Y</pubmed_authors><pubmed_authors>Lu T</pubmed_authors><pubmed_authors>Han X</pubmed_authors><pubmed_authors>Guo C</pubmed_authors><pubmed_authors>Xu H</pubmed_authors><pubmed_authors>Sun Z</pubmed_authors><pubmed_authors>Wang L</pubmed_authors></additional><is_claimable>false</is_claimable><name>Machine learning-based integration develops an immune-derived lncRNA signature for improving outcomes in colorectal cancer.</name><description>Long noncoding RNAs (lncRNAs) are recently implicated in modifying immunology in colorectal cancer (CRC). Nevertheless, the clinical significance of immune-related lncRNAs remains largely unexplored. In this study, we develope a machine learning-based integrative procedure for constructing a consensus immune-related lncRNA signature (IRLS). IRLS is an independent risk factor for overall survival and displays stable and powerful performance, but only demonstrates limited predictive value for relapse-free survival. Additionally, IRLS possesses distinctly superior accuracy than traditional clinical variables, molecular features, and 109 published signatures. Besides, the high-risk group is sensitive to fluorouracil-based adjuvant chemotherapy, while the low-risk group benefits more from bevacizumab. Notably, the low-risk group displays abundant lymphocyte infiltration, high expression of CD8A and PD-L1, and a response to pembrolizumab. Taken together, IRLS could serve as a robust and promising tool to improve clinical outcomes for individual CRC patients.</description><dates><release>2022-01-01T00:00:00Z</release><publication>2022 Feb</publication><modification>2024-11-12T06:29:02.088Z</modification><creation>2024-11-12T06:29:02.088Z</creation></dates><accession>S-EPMC8831564</accession><cross_references><pubmed>35145098</pubmed><doi>10.1038/s41467-022-28421-6</doi></cross_references></HashMap>