Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

E-GEOD-16744

ABSTRACT: Transcription profiling by array of mouse newborn inner ears from wild type and COUP-TFI -/- mice

OTHER RELATED OMICS DATASETS IN: PRJNA117441

PROVIDER: E-GEOD-16744 | ExpressionAtlas | 2014-07-09

REPOSITORIES: ExpressionAtlas

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	E-GEOD-16744-analysis-methods.tsv	Tabular
	E-GEOD-16744-atlasExperimentSummary.Rdata	Rdata
	E-GEOD-16744-configuration.xml	Xml
	E-GEOD-16744-percentile-ranks.tsv	Tabular
	E-GEOD-16744.condensed-sdrf.tsv	Tabular

Items per page:

1 - 5 of 60

Similar Datasets

Transcriptional changes in Sohlh1/Sohlh2 double knockout newborn mouse ovaries

Project description:Sohlh1 and Sohlh2 are germ cell-specific basic helix-loop-helix transcription factors critical in early folliculogenesis. Differential genes expression by both Sohlh1 and Sohlh2 deficiency in mouse newborn ovaries was accessed using microarray. RNA samples from Sohlh1/ Sohlh2 double knockout and wild-type newborn ovaries were arrayed on the Illumina beadchip mouse WG-6 2.0.

2010-10-22 | GSE24815 | GEO

The protein kinase KIS impacts gene expression in the neonate brain

Project description:The protein kinase KIS (product of the gene UHMK1) is expressed during mouse brain development and is proposed to control gene expression through the phosphorylation of splicing factor SF1. We compared the expression of transcripts in wild type and KIS-ko newborn mouse brain (females) using affymetrix exon 1st arrays. Six pairs of wildtype and KIS-ko brains from littermate female newborn mice were processed for Affymetrix exon 1st array hybridization. Analysis was performed at the exon level using PLIER normalisation and the Affymetrix Expression Console.

2012-09-05 | E-GEOD-38097 | biostudies-arrayexpress

Elevated pulmonary arterial pressure and altered expression of Ddah1 and Arg1 in mice lacking Cavin-1/PTRF

Project description:Lungs from newborn cavin-1/PTRF-deficient and wild-type mice were analyzed 6 cavin-1 deficient newborn mice and 6 wild-type mice

2013-06-01 | E-GEOD-43561 | biostudies-arrayexpress

Transcription profiling of mouse ovaries from newborns

Project description:Microarray analysis of normal newborn ovarian transcript levels, for use in comparison to array based studies of differential expression in mouse knockout models. Experiment Overall Design: Newborn ovaries were pooled separately from wild type animals and total RNA isolated using RNeasy mini kit (Qiagen, CA). Newborn ovaries were collected within 12 hours of delivery. Animal experimentation was approved by the Institutional Animal Care and Use Committee of Baylor College of Medicine. Three independently pooled RNA samples from wild type used to generate biotinylated cRNA. Biotinylated cRNA was hybridized to GeneChip Mouse Expression Set 430 2.0 (Affymetrix, Inc.). Since three independent experiments were performed from three independent pools of wild type RNA, signal intensities for particular genes were averaged between the three chips.

2008-06-15 | E-GEOD-7776 | biostudies-arrayexpress

Elevated pulmonary arterial pressure and altered expression of Ddah1 and Arg1 in mice lacking Cavin-1/PTRF

Project description:Lungs from newborn cavin-1/PTRF-deficient and wild-type mice were analyzed

2013-06-01 | GSE43561 | GEO

Transcriptional changes in Sohlh1/Sohlh2 double knockout newborn mouse ovaries

2010-10-22 | E-GEOD-24815 | biostudies-arrayexpress

Mus musculus

Project description:Mouse liver transcription profiling by array

| PRJNA238597 | ENA

p38a-dependent gene expression in keratinocytes

Project description:Gene expression in wild-type and p38a-knockout keratinocytes were compared. Keratinocytes were isolated from newborn mice, and left unirradiated (0 h) and irradiated (4 h) with ultraviolet-B (UVB). C57BL/6 wild-type mice, and keratinocyte-specific p38a-knockout mice on a C57BL/6 background were used for isolation of primary keratinocytes.

2014-01-01 | GSE51206 | GEO

Mouse Intestinal HMGCR complex

Project description:Mice lacking 3-hydroxy-3-methylglutaryl-coenzyme A reductase (Hmgcr) in intestinal villus and crypt epithelial cells were generated using a Villin-Cre transgene. Label free proteome profiling was measure for Wild type and KO mouse.

2021-06-08 | MSV000087589 | MassIVE

Mus musculus

Project description:Transcription profiling of mouse liver by array

| PRJNA240894 | ENA