Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

E-MTAB-6275

ABSTRACT: Transcriptional profiling of autophagy proficient and compromised cell lines, determined by expression levels of Atg5

PROVIDER: E-MTAB-6275 | ExpressionAtlas | 2019-08-30

REPOSITORIES: ExpressionAtlas

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	E-MTAB-6275-analysis-methods.tsv	Tabular
	E-MTAB-6275-atlasExperimentSummary.Rdata	Rdata
	E-MTAB-6275-configuration.xml	Xml
	E-MTAB-6275-percentile-ranks.tsv	Tabular
	E-MTAB-6275.condensed-sdrf.tsv	Tabular

Items per page:

1 - 5 of 36

Similar Datasets

Homo sapiens

Project description:Expression Profiling on Human Cell Lines with Different Acetylation Levels

| PRJNA214579 | ENA

Transcriptional Profiling of Leiomyosarcoma Cell Lines

Project description:Transcriptional Profiling of Leiomyosarcoma Cell Lines

| PRJNA602391 | ENA

Exploration and clinical validation of molecular typing of early colorectal cancer

Project description:Interventions: Case series:None Primary outcome(s): exon genes;transcriptional expression;proteome;protein phosphorylation group Study Design: Sequential

| 2739647 | ecrin-mdr-crc

Transcriptome profiling of three giant cell tumour of bone cell lines

Project description:Transcriptome profiling of three established giant cell tumour of bone (GCTB) cell lines on the BGISEQ-500 platform (PE100). Cell lines consist of neoplastic "stromal" cells harboring a heterozygous H3F3A p.G34W mutation. Data was used in a study (Venneker et al., Histone deacetylase inhibitors as a therapeutic strategy to eliminate neoplastic Ã¢Â€ÂœstromalÃ¢Â€Â cells from giant cell tumors of bone, 2022) to determine H3F3A-WT/MT expression ratios, to identify pathogenic variants, and to examine the expression levels of epigenetic modifiers and regulators.

| EGAS00001006441 | EGA

Transcriptional Profiling of CENPA-Depleted Prostate Cancer Cell Lines

Project description:Transcriptional Profiling of CENPA-Depleted Prostate Cancer Cell Lines

| PRJNA525633 | ENA

Transcriptional profiling of human MCF7 cell lines by RNASeq

Project description:Transcriptional profiling of human MCF7 cell lines by RNASeq

| PRJNA666627 | ENA

Homo sapiens

Project description:Expression profiling of leukemia cell lines

| PRJNA92937 | ENA

Expression Profiling on Human Cell Lines with Different Acetylation Levels

Project description:Expression Profiling on Human Cell Lines with Different Acetylation Levels

2014-08-06 | GSE49640 | GEO

The ets transcription factor ELF5 suppresses the estrogen sensitive phenotype and contributes to antiestrogen resistance in luminal breast cancer. [human ChIP-Seq]

Project description:The ets transcription factor ELF5 specifies the differentiation of mammary progenitor cells to establish the milk-secreting lineage. ER- and poor prognosis basal breast cancers arise from this progenitor cell and these cancers express high levels of Elf5. Knockdown of ELF5 expression in basal breast cancer cell lines, or forced expression in luminal breast cancer cell lines, resulted in reduced cell proliferation. Transcript profiling and chromatin immunoprecipitation revealed that the transcriptional activity of ELF5 specified the gene expression patterns that distinguish basal from luminal breast cancer, including suppression of FOXA1, GATA3 and ER, key estrogen-action genes. Tamoxifen treatment of luminal MCF7 cells upregulated Elf5 expression and cells that acquired resistance to Tamoxifen became dependent on ELF5 for proliferation. ELF5 is a regulator of breast cancer cell proliferation, transcriptionally specifies the basal molecular subtype and is utilised by ER+ breast cancer cells to escape proliferative arrest caused by Tamoxifen. ChIP-Seq using an antibody to ELF5, in T47D breast carcinoma cell lines

2012-12-27 | E-GEOD-31216 | biostudies-arrayexpress

Transcriptional Profiling of Clonal Cell Lines with Different Circadian Period

Project description:Transcriptional Profiling of Clonal Cell Lines with Different Circadian Period

| PRJNA548677 | ENA