Browse
Submit Data
Databases
API
Help

Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

42 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Transcription profiling of Arabidopsis plants (tup3 mutant and Col-0gl) in cotyledon stage after treatmeant with cytokinin or auxin for different times

ABSTRACT: RNA was extracted from whole Arabidopsis plants(tup3 mutant and Col-0gl)in cotyledon stage under treatmeant (different times: 0 min, 15 min, 120 min) with cytokinin (1 µM BA) and/or auxin (1µM NAA).

ORGANISM(S): Arabidopsis thaliana

SUBMITTER: Wolfram Brenner

PROVIDER: E-CAGE-49 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

ACCESS DATA

Json Xml

Similar Datasets

Transcription profiling of Arabidopsis thaliana ecotype Col-0 vs Arabidopsis thaliana ecotype Ler, both grown to Boyes scale 1.04 performed at VIB

Project description:A dye swap experiment to compare Arabidopsis thaliana ecotype Col-0 with Arabidopsis thaliana ecotype Ler, both grown to Boyes scale 1.04 at VIB, Plant systems biology, Gent, Belgium

2005-01-01 | E-CAGE-10 | biostudies-arrayexpress

Transcription profiling of Arabidopsis self vs self experiment Col-0 vs Col-0 samples performed at MPI

Project description:Dye swap experiment to compare two separate batches of amplified RNA derived from the same Arabidopsis thaliana Col-0 total RNA extracted at VIB.

2005-01-01 | E-CAGE-6 | biostudies-arrayexpress

Transcription profiling of Arabidopsis Col-0 vs Ler samples performed at MPI

Project description:Dye swap experiment to compare Arabidopsis thaliana Col-0 against Arabidopsis thaliana Ler, both grown at VIB, Plant systems biology, Gent, Belgium

2005-01-01 | E-CAGE-7 | biostudies-arrayexpress

Transcription profiling of Arabidopsis self vs self experiment Col-0 vs Col-0 samples performed at MPI

Project description:Dye swap experiment comparing Arabidopsis thaliana Col-0 seedlings at growth stage 1.04 grown at VIB, Plant systems biology, Gent, Belgium against a sample meeting the same experimental conditions grown at FU Berlin.

2005-01-01 | E-CAGE-5 | biostudies-arrayexpress

Transcription profiling of Arabidopsis elf self experiment Col-0 vs Col-0 samples performed at MPI

Project description:Dye swap experiment to compare two independent samples of Arabidopsis thaliana Col-0 grown at FU Berlin to growth stage 1.04 under the same conditions.

2005-01-01 | E-CAGE-8 | biostudies-arrayexpress

Transcription profiling of Arabidopsis elf self experiment Col-0 vs Col-0 samples performed at MPI

Project description:A dye swap experiment to compare Arabidopsis thaliana ecotype Col-0 grown to stage 1.04 (Boyes scale) at VIB, Plant systems biology, Gent, Belgium with Arabidopsis thaliana ecotype Col-0 grown to stage 1.04 (Boyes scale) at FU Berlin.

2005-01-01 | E-CAGE-9 | biostudies-arrayexpress

Transcription profiling of leaves 1 and 2 from Arabidopsis plants treated with naphtylacetic acid and incubated for 15 mins or 2 hours

Project description:Arabidopsis thaliana Col-0 wildtype plants were grown on soil (Jiffy7 peat pellets 42 mm) to the respective developmental stage (1.04 or 1.08 Boyes scale). The plants were sprayed with 100 µM Naphtylacetic acid and incubated for 15 min or 2 hours under normal growth conditions. Leaves 1 and 2 were harvested and immediately frozen in liquid nitrogen.

2007-05-16 | E-CAGE-46 | biostudies-arrayexpress

Transcription profiling of Arabidopsis leaves 1 and 2 at Boyes stages 1.04 and 1.08 in response to treatment with Abscisic acid

Project description:Arabidopsis thaliana Col-0 wildtype plants were grown on soil (Jiffy7 peat pellets 42 mm) to the respective developmental stage (1.04 or 1.08 Boyes scale). The plants were sprayed with 50 µM Abscisic acid and incubated for 15 min or 2 hours under normal growth conditions. Leaves 1 and 2 were harvested and immediately frozen in liquid nitrogen.

2006-10-31 | E-CAGE-48 | biostudies-arrayexpress

Transcription profiling of Arabidopsis Col-0 plants with wild type, arr1-1 knock-out, ARR1 over-expressor and ARR1-SRDX fusion protein over-expressor genotypes treated with 6-Benzyladenine for different lengths of time

Project description:Arabidopsis thaliana Col-0 plants and three other genotypes (ARR1 overexpressor, arr1-1 knockout, overexpressor of ARR1-SRDX fusion protein) were grown in liquid media (1/2 MS, 1 g/L sucrose, 0.5 g/L MES, pH 5.7) in a Percival AR-66L growth chamber at 24 oC, 16:8 h day:night cycle, and 100 µE light intensity until growth stage 1.0. Plants were then treated with 5 µM 6-Benzyladenine for 0, 15, and 120 min, harvested and frozen in liquid nitrogen for RNA extraction and subsequent processing for microarray hybridization.

2008-08-31 | E-MEXP-689 | biostudies-arrayexpress

Transcription profiling of flowers from Arabidopsis thaliana Col-0 at developmental stage Boyes Key 6.10

Project description:The first flower from Arabidopsis thaliana Col-0 at developmental stage 6.10 hybridized against the CAGE oligonucleotide reference

2007-01-11 | E-CAGE-22 | biostudies-arrayexpress

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data