Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

0

Expression in HepG2 cells with overexpression of TMPRSS6 or its mutant version.


ABSTRACT: TMPRSS6 is a type II transmembrane serine protease and is revealed by our work to be part of a low-iron sensing pathway. When animal gets iron deficient, TMPRSS6 is required to shut off hepcidin gene, so as to allow iron to be uptaken from GI tract. The mutant mouse, which was generated by ENU mutagenesis, has developed microcytic anemia. The phenotype is caused by a splicing error in Tmprss6 gene. However, the mechanism of TMPRSS6 effect remains elusive. To gain further insight into the molecular components of the TMPRSS6 signaling pathway, we overexpressed either TMPRSS6 or its mutant version of protein in human liver carcinoma cell line HepG2 cells, and compared the transcription status betweem these two treatments. Experiment Overall Design: Triplicate per transfection with wildtype Tmprss6 cDNA, mutant version of Tmprss6 cDNA and empty vector as control, respectively. 36 hours post transfection, cells were harvested and subjected to RNA extraction.

ORGANISM(S): Homo sapiens

SUBMITTER: Yu Xia 

PROVIDER: E-GEOD-10591 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

altmetric image

Publications


Hepcidin, a liver-derived protein that restricts enteric iron absorption, is the key regulator of body iron content. Several proteins induce expression of the hepcidin-encoding gene Hamp in response to infection or high levels of iron. However, mechanism(s) of Hamp suppression during iron depletion are poorly understood. We describe mask: a recessive, chemically induced mutant mouse phenotype, characterized by progressive loss of body (but not facial) hair and microcytic anemia. The mask phenoty  ...[more]

Similar Datasets

2008-08-01 | GSE10591 | GEO
2015-08-13 | E-GEOD-40069 | biostudies-arrayexpress
2013-10-09 | GSE46287 | GEO
2013-10-09 | E-GEOD-46287 | biostudies-arrayexpress
2020-04-15 | GSE139371 | GEO
2014-11-14 | GSE63200 | GEO
2015-08-13 | GSE40069 | GEO
2009-09-05 | GSE17969 | GEO
2018-12-12 | E-MTAB-7329 | biostudies-arrayexpress
2008-07-07 | GSE10421 | GEO