Unknown,Transcriptomics,Genomics,Proteomics

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Transcription profiling of Arabidopsis roots and shoots in response to hypoxia using immunopurified mRNA-ribosome complexes - SuperSeries


ABSTRACT: This SuperSeries is composed of the following subset Series:; GSE14493: Immunopurified mRNA-ribosome complexes expose cell-type specific plasticity during hypoxia in Arabidopsis root tips; GSE14502: Immunopurified mRNA-ribosome complexes expose cell-type specific plasticity in response to hypoxia in Arabidopsis Experiment Overall Design: Refer to individual Series

ORGANISM(S): Arabidopsis thaliana

SUBMITTER: Angelika Mustroph 

PROVIDER: E-GEOD-14578 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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Publications

Profiling translatomes of discrete cell populations resolves altered cellular priorities during hypoxia in Arabidopsis.

Mustroph Angelika A   Zanetti M Eugenia ME   Jang Charles J H CJ   Holtan Hans E HE   Repetti Peter P PP   Galbraith David W DW   Girke Thomas T   Bailey-Serres Julia J  

Proceedings of the National Academy of Sciences of the United States of America 20091020 44


Multicellular organs are composed of distinct cell types with unique assemblages of translated mRNAs. Here, ribosome-associated mRNAs were immunopurified from specific cell populations of intact seedlings using Arabidopsis thaliana lines expressing a FLAG-epitope tagged ribosomal protein L18 (FLAG-RPL18) via developmentally regulated promoters. The profiling of mRNAs in ribosome complexes, referred to as the translatome, identified differentially expressed mRNAs in 21 cell populations defined by  ...[more]

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