Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

0

Expression profiling of rainbow trout testicular development and spermatogenesis


ABSTRACT: Trout spermatogenesis proceeds seasonally in a way that all morphological and cellular events tend to be synchronized. We thus used gonads at key stages of the male reproductive cycle together with isolated germ cell populations to study the changes in gene expression underlying testis development. Statistical analysis followed by clustering of expression profiles allowed the discrimination of sequential events of gene activation or repression during testis development and/or throughout the germline. 38 samples covering 6 developmental stages (as defined in Gomez et al. 1998 Biol. Reprod. 58, 483-491) and 3 isolated germ cell populations were analysed. This included: - Testes at early stages containing slowly-dividing type A spermatogonia (Stage_I, n=5) or growing numbers of actively-dividing type B spermatogonia (Stages_IIa, n= 4; Stage_IIb, n= 4) - Maturing testes containing in addition large numbers of meiotic spermatocytes (Stage_IIIb, n=3) and post-meiotic spermatids (Stage_V, n=4) - Spawning testes containing essentially mature spermatozoa (Stage_VIII, n=3) - Fractions of isolated germ cells enriched in spermatogonia (Spermatogonia, N=6), spermatocytes (Spermatocyte, N=6) and spermatids (Spermatid, N=3).

ORGANISM(S): Oncorhynchus mykiss

SUBMITTER: Marie-José Ricordel 

PROVIDER: E-GEOD-16029 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

altmetric image

Publications

Expression profiling of rainbow trout testis development identifies evolutionary conserved genes involved in spermatogenesis.

Rolland Antoine D AD   Lareyre Jean-Jacques JJ   Goupil Anne-Sophie AS   Montfort Jérôme J   Ricordel Marie-Jo MJ   Esquerré Diane D   Hugot Karine K   Houlgatte Rémi R   Chalmel Fréderic F   Le Gac Florence F  

BMC genomics 20091120


<h4>Background</h4>Spermatogenesis is a late developmental process that involves a coordinated expression program in germ cells and a permanent communication between the testicular somatic cells and the germ-line. Current knowledge regarding molecular factors driving male germ cell proliferation and differentiation in vertebrates is still limited and mainly based on existing data from rodents and human. Fish with a marked reproductive cycle and a germ cell development in synchronous cysts have p  ...[more]

Similar Datasets

2008-06-20 | E-GEOD-8978 | biostudies-arrayexpress
2016-08-10 | E-GEOD-69417 | biostudies-arrayexpress
2012-10-22 | E-GEOD-39465 | biostudies-arrayexpress
2013-06-20 | E-GEOD-43717 | biostudies-arrayexpress
2023-07-03 | GSE194376 | GEO
2019-01-25 | E-MTAB-6946 | biostudies-arrayexpress
2020-05-02 | GSE130652 | GEO
2017-10-18 | GSE102954 | GEO
2020-02-24 | GSE137307 | GEO
2022-10-28 | PXD037781 | JPOST Repository