Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

0

Small RNA sequencing and analysis of two ants: Camponotus floridanus and Harpegnathos saltator

ABSTRACT: Deep sequencing of small RNA from two Ants: Camponotus floridanus and Harpegnathos saltator Analysis of small RNA expression profile from different specimens: egg,larva,male,minor and major for Camponotus floridanus while egg,larva,male,worker and gammergate for Harpegnathos saltator

ORGANISM(S): Harpegnathos saltator

SUBMITTER: zhiyong huang 

PROVIDER: E-GEOD-22679 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

Json Xml
altmetric image

Publications

The organized societies of ants include short-lived worker castes displaying specialized behavior and morphology and long-lived queens dedicated to reproduction. We sequenced and compared the genomes of two socially divergent ant species: Camponotus floridanus and Harpegnathos saltator. Both genomes contained high amounts of CpG, despite the presence of DNA methylation, which in non-Hymenoptera correlates with CpG depletion. Comparison of gene expression in different castes identified up-regulat  ...[more]

Similar Datasets

Transcriptomics High-throughput sequencing analyses of two ants: Camponotus floridanus and Harpegnathos saltator
2010-08-26 | E-GEOD-22680 | biostudies-arrayexpress
Transcriptomics Transcriptome sequencing and analysis of two ants: Camponotus floridanus and Harpegnathos saltator
2010-08-26 | E-GEOD-22678 | biostudies-arrayexpress
Genomics Genome-wide analysis of global and caste-specific DNA methylation in two ant species: Camponotus floridanus and Harpegnathos saltator
2012-08-08 | E-GEOD-31577 | biostudies-arrayexpress
Methylation profiling Single base resolution methylome of two ants: Camponotus floridanus and Harpegnathos saltator
2012-08-09 | GSE31576 | GEO
Transcriptomics Transcriptome sequencing and analysis of two ants: Camponotus floridanus and Harpegnathos saltator
2010-08-27 | GSE22678 | GEO
Genomics Small RNA sequencing and analysis of two ants: Camponotus floridanus and Harpegnathos saltator
2010-08-27 | GSE22679 | GEO
Transcriptomics Transcriptome sequencing of queen and virgin queen of two ants: Camponotus floridanus and Harpegnathos saltator
2012-08-09 | GSE31346 | GEO
Genomics smRNA sequencing of queen and virgin queen of two ants: Camponotus floridanus and Harpegnathos saltator
2012-08-09 | GSE31344 | GEO
Transcriptomics Transcriptome sequencing of queen and virgin queen of two ants: Camponotus floridanus and Harpegnathos saltator
2012-08-08 | E-GEOD-31346 | biostudies-arrayexpress
Transcriptomics smRNA sequencing of queen and virgin queen of two ants: Camponotus floridanus and Harpegnathos saltator
2012-08-09 | E-GEOD-31344 | biostudies-arrayexpress