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Finding direct target genes of VND7


ABSTRACT: Direct target genes of VND7 were explored with inducible expression system using glucocorticoid receptor (GR). Transgenic plants expressing 35S:VND7-VP16-GR were treated with dexamethazone (DEX) and/or protein synthesis inhibitor cycloheximide (CHX). A number of genes related to the formation of vascular vessel was induced by DEX even in the presence of CHX. Total RNAs of the transgenic plants expressing 35S:VND7-VP16-GR treated with DEX plus CHX and those treated with CHX only were compared. As a control experiment, transgenic plants harboring empty vector were treated similarly and the total RNAs were compared similarly to identify genes merely induced by DEX treatment itself.

ORGANISM(S): Arabidopsis thaliana

SUBMITTER: Nobuitaka Mitsuda 

PROVIDER: E-GEOD-24169 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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Publications

VASCULAR-RELATED NAC-DOMAIN7 directly regulates the expression of a broad range of genes for xylem vessel formation.

Yamaguchi Masatoshi M   Mitsuda Nobutaka N   Ohtani Misato M   Ohme-Takagi Masaru M   Kato Ko K   Demura Taku T  

The Plant journal : for cell and molecular biology 20110307 4


The Arabidopsis thaliana NAC domain transcription factor, VASCULAR-RELATED NAC-DOMAIN7 (VND7), acts as a key regulator of xylem vessel differentiation. In order to identify direct target genes of VND7, we performed global transcriptome analysis using Arabidopsis transgenic lines in which VND7 activity could be induced post-translationally. This analysis identified 63 putative direct target genes of VND7, which encode a broad range of proteins, such as transcription factors, IRREGULAR XYLEM prote  ...[more]

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