Browse
Submit Data
Databases
API
Help

Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

SNP and Expression data from the Cancer Cell Line Encyclopedia (CCLE)

ABSTRACT: This SuperSeries is composed of the following subset Series: GSE36133: Expression data from the Cancer Cell Line Encyclopedia (CCLE) GSE36138: SNP array data from the Cancer Cell Line Encyclopedia (CCLE) Refer to individual Series

ORGANISM(S): Homo sapiens

SUBMITTER: Nicolas Stransky

PROVIDER: E-GEOD-36139 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

ACCESS DATA

Json Xml

Similar Datasets

SNP array data from the Cancer Cell Line Encyclopedia (CCLE)

Project description:The Cancer Cell Line Encyclopedia (CCLE) project is a collaboration between the Broad Institute, the Novartis Institutes for Biomedical Research and the Genomics Novartis Foundation to conduct a detailed genetic and pharmacologic characterization of a large panel of human cancer models It consists of a compilation of gene expression, chromosomal copy number, and massively parallel sequencing data from nearly 1,000 human cancer cell lines. All raw and processed data are available through an integrated portal on www.broadinstitute.org/ccle The final cell line collection spans 36 cancer types. Representation of cell lines for each cancer type was mainly driven by cancer mortality in the United States, as a surrogate of unmet medical need, as well as availability.

2012-03-20 | E-GEOD-36138 | biostudies-arrayexpress

Expression data from the Cancer Cell Line Encyclopedia (CCLE)

2012-03-20 | E-GEOD-36133 | biostudies-arrayexpress

Homo sapiens

Project description:Cancer Cell Line Encyclopedia (CCLE)

| PRJNA523380 | ENA

RNA-seq of 39 human cancer cell lines that are in the NCI-60 set from the Cancer Cell Line Encyclopedia

Project description:RNA-seq of 39 human cancer cell lines that are in the NCI-60 set from the Broad-Novartis Cancer Cell Line Encyclopedia (http://www.broadinstitute.org/ccle). Read data is held in the Cancer Genomics Hub (https://cghub.ucsc.edu/).

2015-02-16 | E-MTAB-2980 | biostudies-arrayexpress

Homo sapiens

Project description:Expression data from the Cancer Cell Line Encyclopedia (CCLE)

| PRJNA155793 | ENA

Project description:Cancer Cell Line Encyclopedia (CCLE) Long Read RNA-seq

| PRJNA1077632 | ENA

RNA-seq of 1019 human cancer cell lines from the Cancer Cell Line Encyclopedia

Project description:RNA-seq of 1019 human cancer cell lines from the Broad-Novartis Cancer Cell Line Encyclopedia (http://www.broadinstitute.org/ccle). The original annotation of each cell line to a disease has been checked and manually curated by Expression Atlas (https://www.ebi.ac.uk/gxa/home). Note the original version of the dataset contained 934 cell lines. In the latest update, 2 cell lines were removed (presumed duplicates) and 87 added new.

2013-05-31 | E-MTAB-2770 | biostudies-arrayexpress

Homo sapiens

Project description:SNP array data from the Cancer Cell Line Encyclopedia (CCLE)

| PRJNA155797 | ENA

SNP array data from the Cancer Cell Line Encyclopedia (CCLE)

2012-03-20 | GSE36138 | GEO

Expression data from the Cancer Cell Line Encyclopedia (CCLE)

2012-03-20 | GSE36133 | GEO