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Divergent Patterns of Endogenous Small RNA Populations From Seed and Vegetative Tissues of Glycine max

ABSTRACT: An overview of small RNAs sequences existing in seed development and contrasted with vegetative tissues of the soybean Four small RNA sequence populations from high throughput deep sequencing-by-synthesis and representing different tissues/organs of the soybean were characterized into small RNA classes, level of expresion, genes of origin and putative targeted genes

ORGANISM(S): Glycine max

SUBMITTER: Lila Vodkin

PROVIDER: E-GEOD-36728 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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Divergent patterns of endogenous small RNA populations from seed and vegetative tissues of Glycine max.

Zabala Gracia G Campos Edhilvia E Varala Kranthi K KK Bloomfield Sean S Jones Sarah I SI Win Hlaing H Tuteja Jigyasa H JH Calla Bernarda B Clough Steven J SJ Hudson Matthew M Vodkin Lila O LO

BMC plant biology 20121002

<h4>Background</h4>Small non-coding RNAs (smRNAs) are known to have major roles in gene regulation in eukaryotes. In plants, knowledge of the biogenesis and mechanisms of action of smRNA classes including microRNAs (miRNAs), short interfering RNAs (siRNAs), and trans-acting siRNAs (tasiRNAs) has been gained mostly through studies with Arabidopsis. In recent years, high throughput sequencing of smRNA populations has enabled extension of knowledge from model systems to plants with larger, more com ...[more]

PMID: 23031057

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