Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

0

Dll1 marks early secretory progenitors in gut crypts that can revert to stem cells upon tissue damage


ABSTRACT: The introduction of GFP into the Dll1 locus has made it possible to isolate and study primary intestinal Dll1 positive cells, which constitute the secretory cell precursors of the intestine. Applying DNA array technology, we profiled the RNA changes of FACS-sorted Dll1_high/CD24_low, Dll1_high/CD24_medium and Dll1_high/CD24_high cells . We used cell fractions of intestines from Dll1-EGFP-ires-CreERT2 mice, expressing GFP under the control of the Dll1 promoter. RNA was isolated from three FACS sorted cell populations: all are expressing Dll1-GFP at high levels, but are expressing different levels of Cd24 (low, medium and high). For this set two biological replicates were generated. One additional fraction was isolated from Lgr5-EGFP-ires-CreERT2 mice, expressing GFP under the control of the Lgr5 promoter. This cell fraction contains intestinal stem cells. Differentially labelled cRNA from these cell fractions was hybridized against a reference (RNA isolated from whole intestine) on 4X44K Agilent Whole Mouse Genome dual colour Microarrays (G4122F).

ORGANISM(S): Mus musculus

SUBMITTER: Daniel Stange 

PROVIDER: E-GEOD-39915 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

altmetric image

Publications


Lgr5+ intestinal stem cells generate enterocytes and secretory cells. Secretory lineage commitment requires Notch silencing. The Notch ligand Dll1 is expressed by a subset of immediate stem cell daughters. Lineage tracing in Dll1(GFP-ires-CreERT2) knock-in mice reveals that single Dll1(high) cells generate small, short-lived clones containing all four secretory cell types. Lineage specification thus occurs in immediate stem cell daughters through Notch lateral inhibition. Cultured Dll1(high) cel  ...[more]

Similar Datasets

2012-08-15 | E-GEOD-36497 | biostudies-arrayexpress
2014-09-08 | E-GEOD-52813 | biostudies-arrayexpress
2012-08-12 | E-GEOD-23672 | biostudies-arrayexpress
2012-08-12 | E-GEOD-33948 | biostudies-arrayexpress
2013-04-25 | E-GEOD-46303 | biostudies-arrayexpress
2010-03-25 | E-GEOD-20269 | biostudies-arrayexpress
2010-11-29 | E-GEOD-25109 | biostudies-arrayexpress
2009-03-25 | E-GEOD-14201 | biostudies-arrayexpress
2012-08-12 | E-GEOD-33949 | biostudies-arrayexpress
2021-11-03 | PXD024680 | Pride