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Transcription profiling by high throughput sequencing of six tissues of Brassica rapa

ABSTRACT: Deep sequencing of mRNA from six different tissues Analysis of poly(A)+ RNA of multiple different tissues of Brassica rapa containing Callus, Root, Stem, Leaf, Flower and Silique.

ORGANISM(S): Brassica rapa

SUBMITTER: Chaobo Tong

PROVIDER: E-GEOD-43245 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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Comprehensive analysis of RNA-seq data reveals the complexity of the transcriptome in Brassica rapa.

Tong Chaobo C Wang Xiaowu X Yu Jingyin J Wu Jian J Li Wanshun W Huang Junyan J Dong Caihua C Hua Wei W Liu Shengyi S

BMC genomics 20131007

<h4>Background</h4>The species Brassica rapa (2n=20, AA) is an important vegetable and oilseed crop, and serves as an excellent model for genomic and evolutionary research in Brassica species. With the availability of whole genome sequence of B. rapa, it is essential to further determine the activity of all functional elements of the B. rapa genome and explore the transcriptome on a genome-wide scale. Here, RNA-seq data was employed to provide a genome-wide transcriptional landscape and characte ...[more]

PMID: 24098974

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