Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

0

Global Profiling in Vestibular Schwannomas Shows Critical Deregulation of MicroRNAs and Upregulation in those included in Chromosomal Region 14q32


ABSTRACT: Background: Vestibular Schwannomas are benign tumors that arise from Schwann cells in the VIII cranial pair and usually present NF2 gene mutations and/or loss of heterozygosity on chromosome 22q. Deregulation has also been found in several genes, such as ERBB2 and NRG1. MicroRNAs are non-coding RNAs approximately 21 to 23 nucleotides in length that regulate mRNAs, usually by degradation at the post-transcriptional level. Methods: We used microarray technology to test the deregulation of miRNAs and other non-coding RNAs present in GeneChip miRNA 1.0 (Affymetrix) over 16 vestibular Schwannomas and 3 control-nerves, validating 10 of them by qRT-PCR. Findings: Our results showed the deregulation of 174 miRNAs, including miR-10b, miR-206, miR-183 and miR-204, and the upregulation of miR-431, miR-221, miR-21 and miR-720, among others. The results also showed an aberrant expression of other non-coding RNAs. We also found a general upregulation of the miRNA cluster located at chromosome 14q32. Conclusion: Our results suggest that several miRNAs are involved in tumor formation and/or maintenance and that global upregulation of the 14q32 chromosomal site may represent a therapeutic target for this neoplasm. 16 Vestibular Schwannomas and 3 control-nerves were analysed

ORGANISM(S): Homo sapiens

SUBMITTER: Miguel Torres-Martin 

PROVIDER: E-GEOD-43571 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

altmetric image

Publications

Global profiling in vestibular schwannomas shows critical deregulation of microRNAs and upregulation in those included in chromosomal region 14q32.

Torres-Martin Miguel M   Lassaletta Luis L   de Campos Jose M JM   Isla Alberto A   Gavilan Javier J   Pinto Giovanny R GR   Burbano Rommel R RR   Latif Farida F   Melendez Barbara B   Castresana Javier S JS   Rey Juan A JA  

PloS one 20130611 6


<h4>Background</h4>Vestibular schwannomas are benign tumors that arise from Schwann cells in the VIII cranial pair and usually present NF2 gene mutations and/or loss of heterozygosity on chromosome 22q. Deregulation has also been found in several genes, such as ERBB2 and NRG1. MicroRNAs are non-coding RNAs approximately 21 to 23 nucleotides in length that regulate mRNAs, usually by degradation at the post-transcriptional level.<h4>Methods</h4>We used microarray technology to test the deregulatio  ...[more]

Similar Datasets

2014-03-24 | GSE43571 | GEO
2019-01-08 | GSE124717 | GEO
2010-09-29 | E-GEOD-24390 | biostudies-arrayexpress
2014-11-30 | GSE56597 | GEO
2014-11-30 | GSE56596 | GEO
2013-03-01 | E-GEOD-39645 | biostudies-arrayexpress
2010-09-29 | GSE24390 | GEO
| PRJNA186739 | ENA
2022-08-02 | GSE167560 | GEO
2013-03-01 | GSE39645 | GEO