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Unknown,Transcriptomics,Genomics,Proteomics

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Expression profiling comparisons of human PBMC treated with class I/IIb or class IIa HDAC inhibitors

ABSTRACT: The aim of this study was to identify differential gene expression resulting from the inhibition of class IIa HDACs in human PBMC. Human PBMC were cultured ex vivo with a mitogenic stimulus (1 ug/ml phytohemagglutinin, PHA) for 60 hours concurrent with exposure to vehicle (DMSO), vorinostat (3 uM), or TMP195 (3 uM). In addition to the whole PBMC populations, a portion of the cultures treated with DMSO or TMP195 were used for FACS purification of mutually exclusive CD3+ (T cell), CD19+ (B cell), and CD14+ (monocyte) populations. All samples were then processed for RNA extraction, labeling, and hybridization to Affymetrix arrays. Vehicle vs. vorinostat vs. TMP195 treatments in PBMC; Vehicle vs. TMP195 treatment in CD3+, CD19+ or CD14+ cells

ORGANISM(S): Homo sapiens

SUBMITTER: Scott Davis

PROVIDER: E-GEOD-44621 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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