Unknown,Transcriptomics,Genomics,Proteomics

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Arabidopsis phytochrome A directly targets numerous promoters for individualized modulation of genes in wide range of pathways


ABSTRACT: This SuperSeries is composed of the SubSeries listed below. Refer to individual Series

ORGANISM(S): Arabidopsis thaliana

SUBMITTER: bosheng Li 

PROVIDER: E-GEOD-48770 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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Publications

Arabidopsis Phytochrome A Directly Targets Numerous Promoters for Individualized Modulation of Genes in a Wide Range of Pathways.

Chen Fang F   Li Bosheng B   Li Gang G   Charron Jean-Benoit JB   Dai Mingqiu M   Shi Xiarong X   Deng Xing Wang XW  

The Plant cell 20140502 5


The far-red light (FR) photoreceptor phytochrome A (phyA) contains no DNA binding domain but associates with the CHALCONE SYNTHASE promoter through its chaperone FAR-RED ELONGATED HYPOCOTYL1 and transcription factors. Here, we performed a genome-wide identification of phyA targets using a combination of phyA chromatin immunoprecipitation and RNA sequencing methods in Arabidopsis thaliana. Our results indicate that phyA signaling widely affects gene promoters involved in multiple FR-modulated asp  ...[more]

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