Unknown,Transcriptomics,Genomics,Proteomics

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DNA methylation profiles in primary cutaneous melanoma are associated with clinically significant pathologic features


ABSTRACT: We investigated whether methylation in primary melanomas is associated with tumor pathologic features or defines subgroups of primary melanomas 47 primary cutaneous melanomas were analyzed using the Illumina GoldenGate Cancer Panel I methylation array

ORGANISM(S): Homo sapiens

SUBMITTER: Nathaniel Slater 

PROVIDER: E-GEOD-54623 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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Publications


<h4>Purpose</h4>IL2 inducible T-cell kinase (ITK) promoter CpG sites are hypomethylated in melanomas compared with nevi. The expression of ITK in melanomas, however, has not been established and requires elucidation.<h4>Experimental design</h4>An ITK-specific monoclonal antibody was used to probe sections from deidentified, formalin-fixed paraffin-embedded tumor blocks or cell line arrays and ITK was visualized by IHC. Levels of ITK protein differed among melanoma cell lines and representative l  ...[more]

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