Unknown,Transcriptomics,Genomics,Proteomics

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Differential expression between Sh2b3 knockout and wild type mice


ABSTRACT: To validate the predicted Sh2b3 derived gene regulatory subnetwork using integrative network approach in human population study, we examined the gene expression levels of whole blood in WT (wild-type) and Sh2b3-/- mice by RNA sequencing, and identified the differentially expressed genes. RNA sequencing whole blood samples from 4 WT and 4 Sh2b3-/- mice.

ORGANISM(S): Mus musculus

SUBMITTER: Daniel Levy 

PROVIDER: E-GEOD-65348 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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Publications


Genome-wide association studies (GWAS) have identified numerous loci associated with blood pressure (BP). The molecular mechanisms underlying BP regulation, however, remain unclear. We investigated BP-associated molecular mechanisms by integrating BP GWAS with whole blood mRNA expression profiles in 3,679 individuals, using network approaches. BP transcriptomic signatures at the single-gene and the coexpression network module levels were identified. Four coexpression modules were identified as p  ...[more]

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