Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

0

Identification of markers associated with deregulated hTERT during HPV-medaited transformation


ABSTRACT: Although high-risk human papillomavirus (HPV) infection plays a major role in the development of cervical cancer, additive oncogenic events are involved as well. One key event involves increased activity of telomerase resulting from a deregulated expression of its catalytic subunit hTERT. Our previous microcell-mediated chromosome transfer studies revealed that introduction of human chromosome 6 in the HPV16 immortalized keratinocyte cell line FK16A and in the HPV16 containing cervical cancer cell line SiHa induced growth arrest, resulting from a repression of hTERT mRNA expression and telomerase activity. Here, this model was used to analyze expression profiles associated with hTERT deregulation in HPV transformed cells. Microarray expression analysis of 12 FK16A/chromosome 6 hybrids, four of which were negative for endogenous hTERT and 8 of which were positive for endogenous hTERT, resulted in the identification of 164 differentially expressed genes. Differential expression of a selection of 5 genes was verified by real-time RT-PCR. Of these 164 genes, 32 were also differentially expressed in other HPV transformed cells with deregulated hTERT. For 2 of these genes, encoding AQP3 and MGP, altered expression in hTERT positive cervical carcinomas was confirmed by real-time RT-PCR and immunohistochemistry, respectively. In summary we identified 32 candidate biomarkers for deregulated hTERT mRNA expression which may enable the identification of cervical premalignant lesions that are at highest risk to progress to invasive cancer. Keywords: microarray expression analysis, hTERT, cervical cancer 12 previously established cell hybrids, all carrying the same genetic background were subjected to microarray expression analysis. These hybrids were generated by the introduction of chromosome 6 in the HPV16 immortalized cell line FK16A, which resulted in a suppression of hTERT expression and telomerase activity. 8 hybrids were endogenous hTERT positive and 8 hybrids were hTERT negative. Additionally primary keratinocytes (hTERT negative), parental cell line FK16A and cervical cancer cell line SiHa (both hTERT positive) were hybridized.

ORGANISM(S): Homo sapiens

SUBMITTER: Saskia Wilting 

PROVIDER: E-GEOD-8288 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

altmetric image

Publications

Gene expression profiling to identify markers associated with deregulated hTERT in HPV-transformed keratinocytes and cervical cancer.

de Wilde Jillian J   Wilting Saskia M SM   Meijer Chris J L M CJ   van de Wiel Mark A MA   Ylstra Bauke B   Snijders Peter J F PJ   Steenbergen Renske D M RD  

International journal of cancer 20080201 4


Although high-risk human papillomavirus (HPV) infection plays a major role in the development of cervical cancer, additive oncogenic events are involved as well. One key event involves increased activity of telomerase resulting from a deregulated expression of its catalytic subunit hTERT. Our previous microcell-mediated chromosome transfer studies revealed that introduction of human chromosome 6 in the HPV16-immortalized keratinocyte cell line FK16A and in the HPV16-containing cervical cancer ce  ...[more]

Similar Datasets

2008-06-25 | GSE8288 | GEO
2018-01-16 | E-MTAB-6361 | biostudies-arrayexpress
2020-12-21 | GSE147010 | GEO
2023-01-26 | PXD029103 | Pride
2015-11-30 | GSE67115 | GEO
2018-09-24 | PXD011058 | Pride
2022-03-30 | GSE158033 | GEO
2019-03-18 | PXD012186 | Pride
2017-08-13 | GSE90039 | GEO
2020-12-21 | GSE147009 | GEO