Unknown,Transcriptomics,Genomics,Proteomics

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Global gene expression profile of small intestine from wild-type and CFTR-knockout mice.


ABSTRACT: The objective of this study was to identify changes in gene expression levels between wild-type and CFTR-knockout small intestine. CFTR-knockout mice (provided by Dr. Lane Clarke of the University of Missouri) were maintained on colyte. Keywords: gene expression comparison Four wild-type and four CFTR-knockout small intestinal RNA samples were compared. To facilitate statistical analysis and reduce affects of Cy3 and Cy5 labeling, comparison of two WT and two KO were repeated with a dye flip.

ORGANISM(S): Mus musculus

SUBMITTER: Gary Shull 

PROVIDER: E-GEOD-8763 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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Publications

Reduced NHE3-mediated Na+ absorption increases survival and decreases the incidence of intestinal obstructions in cystic fibrosis mice.

Bradford Emily M EM   Sartor Maureen A MA   Gawenis Lara R LR   Clarke Lane L LL   Shull Gary E GE  

American journal of physiology. Gastrointestinal and liver physiology 20090122 4


In cystic fibrosis, impaired secretion resulting from loss of activity of the cystic fibrosis transmembrane conductance regulator (CFTR) causes dehydration of intestinal contents and life-threatening obstructions. Conversely, impaired absorption resulting from loss of the NHE3 Na+/H+ exchanger causes increased fluidity of the intestinal contents and diarrhea. To test the hypothesis that reduced NHE3-mediated absorption could increase survival and prevent some of the intestinal pathologies of cys  ...[more]

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