Unknown,Transcriptomics,Genomics,Proteomics

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HOXA13 Chromatin Immunoprecipitation on human HG18 Nimblegen 2 array promoter set


ABSTRACT: HOXA13 Binding sites were located genome wide in primary human foreskin fibroblasts Tiled promoters with a probe per 100bp of refseq known genes 3kb upstream and 700 bp downstream of transcriptional start

ORGANISM(S): Homo sapiens

SUBMITTER: John Rinn 

PROVIDER: E-GEOD-9922 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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Publications

A dermal HOX transcriptional program regulates site-specific epidermal fate.

Rinn John L JL   Wang Jordon K JK   Allen Nancy N   Brugmann Samantha A SA   Mikels Amanda J AJ   Liu Helen H   Ridky Todd W TW   Stadler H Scott HS   Nusse Roel R   Helms Jill A JA   Chang Howard Y HY  

Genes & development 20080201 3


Reciprocal epithelial-mesenchymal interactions shape site-specific development of skin. Here we show that site-specific HOX expression in fibroblasts is cell-autonomous and epigenetically maintained. The distal-specific gene HOXA13 is continually required to maintain the distal-specific transcriptional program in adult fibroblasts, including expression of WNT5A, a morphogen required for distal development. The ability of distal fibroblasts to induce epidermal keratin 9, a distal-specific gene, i  ...[more]

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