Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

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Transcription profiling of melon fruit during ripening and cotyledons and roots in response to viral and fungal infections


ABSTRACT: We report the construction of an oligo-based microarray using a total of 17,510 unigenes derived from 30,675 high-quality melon ESTs. This chip is particularly enriched with genes that are expressed in fruit and during interaction with pathogens. Hybridizations for three independent experiments allowed the characterization of global gene expression profiles during fruit ripening, as well as in response to viral and fungal infections in plant cotyledons and roots, respectively. Microarray construction, statistical analyses and validation together with functional-enrichment analysis are presented in this study.

ORGANISM(S): Cucumis melo

DISEASE(S): Monosporascus cannonballus infected

SUBMITTER: joaquin Canizares 

PROVIDER: E-MEXP-2334 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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