Browse
Submit Data
Databases
API
Help

Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

50 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Stage specific interaction of C. albicans with oral epithelial cells

ABSTRACT: Comparison of C. albicans grown on oral epithelial cells to C. albicans grown on plastic.

ORGANISM(S): Candida albicans

SUBMITTER: Sascha Brunke

PROVIDER: E-MEXP-3015 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

ACCESS DATA

Json Xml

Similar Datasets

Candida glabrata response to pH change

Project description:Transcriptional profiles of Candida glabrata exposed to two different pH values, 4.5 and 7, in complex medium.

2011-10-31 | E-MEXP-2974 | biostudies-arrayexpress

Interactions of Candida glabrata with human macrophages

Project description:Effect of interaction with human macrophages on the transcriptional profile of Candida glabrata

2011-10-31 | E-MEXP-2973 | biostudies-arrayexpress

Operon Stromal upregulation of lateral epithelial adhesions

Project description:Microarray analysis was used to identify genes that were differentially expressed when epithelial cells were grown in 3D Matrigel culture with stromal co-culture compared to without stroma.

2011-01-01 | E-MEXP-2994 | biostudies-arrayexpress

Candida albicans wild type vs. eed1 during growth on plastic

Project description:C. albicans wild type strain SC5314, the eed1 deletion mutant and an eed1 delta mutant overexpressing UME6 (eed1 + pTET-UME6) were grown on plastic (37°C, RPMI1640 medium, plastic surface, 5% CO2) for 12h. Total RNA was isolated using a phenol-chloroform protocol and labeled with Cy5. Cy5- labeled sample RNA was hybridised with Cy3- labeled common reference (SC5314, 37°C, exponential culture).

2011-05-07 | E-MEXP-3083 | biostudies-arrayexpress

temporal transcriptomic response during arsenic stress in Rhizobium NT-26

Project description:The objective of this study is to identify genes involved in arsenic stress and more particularly to see whether the presence of arsenic can highlight a link between mobility and oxidation

2011-01-01 | E-MEXP-3021 | biostudies-arrayexpress

Candida albicans wild type vs eed1 during RHE infection

Project description:Candida albicans wild type SC5314 and the eed1 delta mutant were used to infect reconstituted human oral epithelium (RHE) for 24h at 37°C and 5% CO2. Samples were taken 1h, 12h and 24h after infection. Total RNA was isolated, labeled with Cy5 and hybridised with a Cy3- labeled common reference.

2011-05-07 | E-MEXP-3085 | biostudies-arrayexpress

BIGenomics_Agilent_15k_templates

Project description:Hybridization of ligation probes to a zipcode (tag) microarray. The purpose of the experiment was to establish functionality and target specificity of the ligation probes by using pools of synthetic templates with all of the probes. The templates are 80-mer synthetic dsDNA molecules, each specific for a single probe. Each probe is a ssDNA molecule containing target recognition sequences, PCR primer binding sequences and a unique tag sequence. If a matching target sequence is present in the mixture, the probes is ligated into a circular molecule, which can be PCR amplified and hybrized on a microarray harbouring complementary tag sequences.

2012-02-24 | E-MEXP-3538 | biostudies-arrayexpress

BIGenomics HPV zipcode array multiplex PCR tests

Project description:Comparison of two different multiplex PCR primer pools in amplifying target HPV types from plasmid templates. Template concentrations are either 1 ng or 1 pg. Templates are detected by type-spcific LDR probes hybridized on microarray.

2011-05-01 | E-MEXP-3154 | biostudies-arrayexpress

BIGenomics HPV zipcode array multiplex PCR tests 2

Project description:Comparison of two different multiplex PCR primer pools in amplifying target HPV types from plasmid templates. Template concentrations are either 10 pg or 100 pg. Templates are detected by type-spcific LDR probes hybridized on microarray.

2011-08-20 | E-MEXP-3268 | biostudies-arrayexpress

BIGenomics HPV zipcode array multiple plasmid hybridizations

Project description:Replicates of detection of multiple plasmid PCR products by LDR probes on microarray.

2011-05-01 | E-MEXP-3153 | biostudies-arrayexpress