Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

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Transcription profiling time course experiment performed over 24 hours to look at the effects on gene expression of exposure to low red:far-red ratio light in Arabidopsis thaliana plants


ABSTRACT: This experiment was a time course performed over 24 hours to look at the effects on gene expression of exposure to low red:far-red ratio light in Arabidopsis thaliana plants. In this way genes involved in the shade avoidance response might be identified. This experiment was designed for gene identification only and containes no replicates,genes identified were verified by quantitative PCR for publication.

ORGANISM(S): Arabidopsis thaliana

SUBMITTER: Michael Salter 

PROVIDER: E-MEXP-34 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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Publications

Gating of the rapid shade-avoidance response by the circadian clock in plants.

Salter Michael G MG   Franklin Keara A KA   Whitelam Garry C GC  

Nature 20031201 6967


The phytochromes are a family of plant photoreceptor proteins that control several adaptive developmental strategies. For example, the phytochromes perceive far-red light (wavelengths between 700 and 800 nm) reflected or scattered from the leaves of nearby vegetation. This provides an early warning of potential shading, and triggers a series of 'shade-avoidance' responses, such as a rapid increase in elongation, by which the plant attempts to overgrow its neighbours. Other, less immediate, respo  ...[more]

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