Unknown,Transcriptomics,Genomics,Proteomics

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Transcription profiling of 5 mouse strains liver, kidney and testis to identify the contribution of normal variation and genetic background to mammalian gene expression


ABSTRACT: 5 mouse strains, 3 mice per strain, and 4 microarrays per mouse for a total of 60 microarray experiments. Each sample is liver RNA hybridized against a reference RNA consisting of equal parts mouse liver, kidney, and testis RNA. Two of the 4 microarrays per mouse were done with the experimental sample on the Cy3 channel and two with the experimental sample on Cy5.

INSTRUMENT(S): GenePix 4000A [Axon Instruments]

ORGANISM(S): Mus musculus

SUBMITTER: Denise Mauldin 

PROVIDER: E-MEXP-568 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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Publications

The contributions of normal variation and genetic background to mammalian gene expression.

Pritchard Colin C   Coil David D   Hawley Sarah S   Hsu Li L   Nelson Peter S PS  

Genome biology 20060331 3


<h4>Background</h4>Qualitative and quantitative variability in gene expression represents the substrate for external conditions to exert selective pressures for natural selection. Current technologies allow for some forms of genetic variation, such as DNA mutations and polymorphisms, to be determined accurately on a comprehensive scale. Other components of variability, such as stochastic events in cellular transcriptional and translational processes, are less well characterized. Although potenti  ...[more]

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