Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

0

Adherent and suspension baby hamster kidney cells have a different cytoskeleton and surface receptor repertoire


ABSTRACT: Animal cell culture, with single cells growing in suspension, ideally in a chemically defined environment, is the workhorse of biopharmaceutical production. The synthetic environment lacks exogenous growth factors and usually requires a time-consuming adaptation process to select cell clones that proliferate in suspension to high cell numbers. The molecular mechanisms that facilitate the adaptation and that take place inside the cell are largely unknown. Especially for cell lines that are used for virus antigen production such as baby hamster kidney (BHK) cells, the restriction of virus growth through the evolution of undesired cell characteristics properties is highly unwanted. The comparison between adherently growing BHK cells and suspension cells with different susceptibility to foot-and-mouth disease virus revealed differences in the expression of cellular receptors such as integrins and heparan sulfates, and in the organization of the actin cytoskeleton. Transcriptome analyses and growth kinetics demonstrated the diversity of BHK cell clones and confirmed the importance of well-characterized parental cell clones and mindful screening to make sure that essential cellular features do not get lost during adaptation.

INSTRUMENT(S): NextSeq 500

ORGANISM(S): Mesocricetus auratus

SUBMITTER: Florian Pfaff 

PROVIDER: E-MTAB-10417 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

Similar Datasets

2020-04-13 | E-MTAB-8905 | biostudies-arrayexpress
2015-11-19 | E-GEOD-75094 | biostudies-arrayexpress
2019-03-25 | E-MTAB-6954 | biostudies-arrayexpress
2014-08-27 | E-GEOD-55373 | biostudies-arrayexpress
2021-12-31 | E-MTAB-8916 | biostudies-arrayexpress
2010-04-20 | E-GEOD-20604 | biostudies-arrayexpress
2023-01-10 | PXD030497 | Pride
2016-03-29 | E-GEOD-79688 | biostudies-arrayexpress
2021-12-02 | E-MTAB-11038 | biostudies-arrayexpress
2015-11-19 | GSE75094 | GEO