Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

0

RNA-seq of C. elegans young adult hermaphrodites to detect differentially expressed genes in the absence of lsl-1 activity


ABSTRACT: LSL-1 is a novel Zinc-finger transcription factor that we identified in a genome wide RNAi screen as a suppressor of ectopic germline gene expression associated with mutations in let-418, which encodes an ATP-dependent chromatin remodeler. RNA for three different biological replicates was isolated from at least 1000 animals of each genotype: wild type, lsl-1(tm4769) and lsl-1(ljm-1); and then sequence to detect differentially expressed genes in both lsl-1 mutant genotypes compared to wild type animals.

INSTRUMENT(S): Illumina NovaSeq 6000

ORGANISM(S): Caenorhabditis elegans

SUBMITTER: Chantal Wicky 

PROVIDER: E-MTAB-11199 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

Similar Datasets

2023-09-30 | E-MTAB-13189 | biostudies-arrayexpress
2018-05-01 | E-MTAB-5833 | biostudies-arrayexpress
2016-07-08 | E-MTAB-4926 | biostudies-arrayexpress
2010-08-09 | E-GEOD-21761 | biostudies-arrayexpress
2018-03-30 | E-MTAB-6399 | biostudies-arrayexpress
2020-03-16 | E-MTAB-8797 | biostudies-arrayexpress
2014-01-10 | E-GEOD-51931 | biostudies-arrayexpress
| PRJEB36783 | ENA
2021-04-10 | E-MTAB-10205 | biostudies-arrayexpress
2012-12-01 | E-GEOD-33560 | biostudies-arrayexpress