Browse
Submit Data
Databases
API
Help

Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

45 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Transcriptome analysis of Candida albicans exposed to sub-inhibitory amount of fluconazole

ABSTRACT: Candida albicans lab strain SC5314 was exposed to 0.5ug/ml fluconazole for 3h. Transcriptome was compared to no drug control.

INSTRUMENT(S): BGISEQ-500

ORGANISM(S): Candida albicans

SUBMITTER: FENG YANG

PROVIDER: E-MTAB-11881 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

ACCESS DATA

Json Xml

Similar Datasets

Transcriptome analysis of Cryptococcus neoformans in response to tunicamycin

Project description:Cryptococcus neoformans lab strain H99 was exposed to 0.0625ug/ml and 0.5ug/ml tunicamycin for 3h. Transcritpomes were compared to no drug treated cells.

2023-02-09 | E-MTAB-12286 | biostudies-arrayexpress

Transcriptome analysis of Candida glabrata exposed to tunicamycin

Project description:Candida glabrata lab strain BG2 was grown in YPD broth at 37C from OD600=0.1 till 1.0. The culture was divided into three batches: no treatement (control), treated with 0.5ug/ml TUN (sub-MIC treatment) and treated with 8ug/ml tnicamycin (supra-MIC treatment). After 3 h of drug exposure, cells were harvested.

2022-09-30 | E-MTAB-12430 | biostudies-arrayexpress

Whole genome sequencing of BG2 derived adaptors selected from sub-inhibitory amount of tunicamycin

Project description:Candida albicans lab strain BG2 was grown in YPD broth supplemented with 0.5ug/ml tunicamycin at 37C for 24h. We used three techinical repeats. The culture was washed, and diluted with distilled water. Then approximately 200 cells from each of the three cultures were spread on YPD plates. Randomly 99 colonies from each culture were tetsted for tolerance to tunicamycin, as compared to the parent BG2. In total we got 6 tolerant adaptors. These 6 adaptors as well as the parent were sequenced.

2022-12-11 | E-MTAB-12427 | biostudies-arrayexpress

Comparison of transcriptomes of aneuploids and euploid parent in Candida albicans

Project description:C. albicans lab strain SC5314 was used to obtain two aneuploid (FY1284 and FY1285) derivatives. Then we compared the transcriptomes of derivatives and the parent.

2022-07-08 | E-MTAB-11890 | biostudies-arrayexpress

Comparison of Candida albicans lab strain SC5314 grown at different temperatures

Project description:Candida albicans lab strain SC5314 was grown in YPD broth at 30C and 37C from OD600=0.1 till 1.0. Cells were harvested and flash frozen in liquid nitrogen. Then the transcriptome was compared.

2022-07-18 | E-MTAB-11924 | biostudies-arrayexpress

Expt 6---Comprative transcriptomics of euploid and aneuploid Candida albicans strains

Project description:Candida albicans lab strain SC5314, which is a euploid diploid, was used to generate aneuploid fluconazole adaptors. Transcriptomes of aneuploids were compared to the euploid parent by growing cells in rich YPD broth.

2022-09-26 | E-MTAB-12185 | biostudies-arrayexpress

Transcriptome analysis of Candida albicans strains exposed to different concentrations of fluconazole at different temperatures

Project description:Candia albicans strains SC5314, YJB-T490 and YJB-T1891 were grown in yeast extract peptone dextrose (YPD) broth at 30°C and 37°C, and exposed to 2 ug/ml and 16 ug/ml of fluconazole. 3h later, cells were harvested. Transcriptome was compared to cells grown in the absence of fluconazole.

2022-10-02 | E-MTAB-12200 | biostudies-arrayexpress

Transecriptome analysis of Cryptococcus neoformans exposed to ER stress inducer brefeldin A

Project description:Cryptococcus neoformans lab strain H99 was treated with 8ug/ml and 32ug/ml brefeldin A for 3h. The transcriptomes were compared to no drug treated cells.

2022-10-24 | E-MTAB-12285 | biostudies-arrayexpress

Transcriptome analysis of a petite phenotype in Candida glabrata

Project description:Candida glabrata strain BG2 was exposed to ER stress inducer tunicamycin (8μg/ml). One adaptor (TJ255) was petite. Transcriptomes of TJ255 and BG2 were compared.

2023-06-02 | E-MTAB-12984 | biostudies-arrayexpress

Transcriptome analysis of Candida albicans exposed to sub-inhibitory and inhibitory concentrations of tunicamycin

Project description:We exposed log phase cells of C. albicans lab strain SC5314 to sub-inhibitory (1 µg/ml) and inhibitory (4 µg/ml) of tunicamycin for 1 h, then compared the transcriptome to the no drug treated cells.

2021-05-09 | E-MTAB-10391 | biostudies-arrayexpress

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data