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Unknown,Transcriptomics,Genomics,Proteomics

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RNA-Seq maize B73

ABSTRACT: In this study, plants of maize inbred line B73 descended from two different sets of seed material grown for several generations either in the field or in the greenhouse were found to show a different growth phenotype and ionome under phosphate starvation conditions and moreover a different responsiveness towards mycorrhizal fungi of the species Glomus intraradices (syn: Rhizophagus irregularis).Transcriptome sequencing of three individuals from each set lent further support to the location of the introgression intervals and confirmed them to be fixed in all sequenced individuals. Moreover, we identified >120 genes differentially expressed between the two B73 lines.

INSTRUMENT(S): Illumina HiScanSQ

ORGANISM(S): Zea mays

SUBMITTER: Uwe Scholz

PROVIDER: E-MTAB-4285 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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Sequence and ionomic analysis of divergent strains of maize inbred line B73 with an altered growth phenotype.

Mascher Martin M Gerlach Nina N Gahrtz Manfred M Bucher Marcel M Scholz Uwe U Dresselhaus Thomas T

PloS one 20140507 5

Maize (Zea mays) is the most widely grown crop species in the world and a classical model organism for plant research. The completion of a high-quality reference genome sequence and the advent of high-throughput sequencing have greatly empowered re-sequencing studies in maize. In this study, plants of maize inbred line B73 descended from two different sets of seed material grown for several generations either in the field or in the greenhouse were found to show a different growth phenotype and i ...[more]

PMID: 24804793

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