Comparison of root transcriptomes in four soybean cultivars with high and low isoflavonoid content
Ontology highlight
ABSTRACT:
INSTRUMENT(S): RNeasy Plant Mini Kit (Qiagen), Illumina HiSeq 2000
ORGANISM(S): Glycine max
SUBMITTER: Mehran Dastmalchi
PROVIDER: E-MTAB-4929 | biostudies-arrayexpress |
REPOSITORIES: biostudies-arrayexpress
Publications
Transcriptomic evidence for the control of soybean root isoflavonoid content by regulation of overlapping phenylpropanoid pathways.
Dastmalchi Mehran M Chapman Patrick P Yu Jaeju J Austin Ryan S RS Dhaubhadel Sangeeta S
BMC genomics 20170111 1
<h4>Background</h4>Isoflavonoids are a class of specialized metabolites found predominantly in legumes. They play a role in signaling for symbiosis with nitrogen-fixing bacteria and inhibiting pathogen infection.<h4>Results</h4>A transcriptomic approach using soybean cultivars with high (Conrad and AC Colombe) and low (AC Glengarry and Pagoda) root isoflavonoid content was used to find elements that underlie this variation. Two genes, encoding the flavonoid-metabolizing enzymes, flavonoid 3'-hyd ...[more]
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