Unknown,Transcriptomics,Genomics,Proteomics

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Time-lapse Deep-seq of E. coli Metabolite Production Pathway


ABSTRACT: Understand the mechanisms of evolution in large-scale bio-production by tracking population dynamics leading to production decline in mevalonic acid-producing Escherichia coli. Industrial bioproduction entails growth of the production host to large bioreactors (e.g. 1-300 m3). This may put the organism at risk for generating non-producing subpopulations of genetic heterogeneity, which is not phenotypically detected at lab-scale (e.g. 2 L). To study these dynamics, we experimentally simulated these growth durations by passing mevalonic acid-producing E. coli to maintain the populations in exponential growth for 45 generations.

INSTRUMENT(S): Illumina MiSeq

ORGANISM(S): Escherichia coli K-12

SUBMITTER: Peter Rugbjerg 

PROVIDER: E-MTAB-5862 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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