Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

0

A novel TetR-like transcriptional regulator is induced in acid-nitrosative stress and controls expression of an efflux pump in mycobacteria


ABSTRACT: Mycobacterium tuberculosis has the ability to survive inside macrophages under acid-nitrosative stress. M. tuberculosis Rv1685c and its orthologue in M. smegmatis, MSMEG_3765, are induced on exposure to acid-nitrosative stress. Both genes are annotated as TetR transcriptional regulators, a family of proteins that regulate a wide range of cellular activities, including multidrug resistance, carbon catabolism and virulence. Here we demonstrate that MSMEG_3765 is co-transcribed with the upstream genes MSMEG_3762 and MSMEG_3763, encoding efflux pump components. RTq-PCR and GFP-reporter assays showed that the MSMEG_3762/63/65 gene cluster, and the orthologous region in M. tuberculosis (Rv1687c/86c/85c), was up-regulated in a MSMEG_3765 null mutant, suggesting that MSMEG_3765 acts as a repressor, typical of this family of regulators. We further defined the MSMEG_3765 regulon using genome-wide transcriptional profiling and confirmed that the MSMEG_3762/63/65 promoter is induced under acid-nitrosative stress. A putative 36 bp regulatory motif was identified upstream of the gene clusters in both M. smegmatis and M. tuberculosis and purified recombinant MSMEG_3765 protein was found to bind to DNA fragments containing this motif from both M. smegmatis and M. tuberculosis upstream regulatory regions. These results suggest that the TetR repressor MSMEG_3765/Rv1685c controls expression of an efflux pump with an, as yet, undefined role in the mycobacterial response to acid-nitrosative stress.

ORGANISM(S): Mycobacterium smegmatis

SUBMITTER:  

PROVIDER: E-MTAB-5869 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

Similar Datasets

2019-10-02 | E-MTAB-7627 | biostudies-arrayexpress
2012-03-08 | E-GEOD-36345 | biostudies-arrayexpress
2016-03-31 | PXD003500 | Pride
2020-08-15 | E-MTAB-6191 | biostudies-arrayexpress
2016-05-23 | PXD004165 | Pride
2016-04-12 | E-MTAB-3872 | biostudies-arrayexpress
2011-01-06 | E-GEOD-26474 | biostudies-arrayexpress
2011-07-14 | E-GEOD-30635 | biostudies-arrayexpress
2021-01-29 | E-MTAB-9904 | biostudies-arrayexpress
2014-07-09 | PXD000253 | Pride