Unknown,Transcriptomics,Genomics,Proteomics

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Selenite treatment of a Yarrowia lipolytica wild type strain

ABSTRACT: In the frame of a multispecies project, Yarrowia lipolytica cells were treated with 10 mM sodium selenite. Cells were collected 10, 20, 30, 40, 50, 60, 70 and 80 minutes after the treatment and their transcriptomes were compared to those of mock-treated cultures. Four independent biological replicates were performed.

ORGANISM(S): Yarrowia lipolytica

SUBMITTER: Frederic Devaux 

PROVIDER: E-MTAB-7044 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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Publications

Comparative Transcriptomics Highlights New Features of the Iron Starvation Response in the Human Pathogen <i>Candida glabrata</i>.

Benchouaia Médine M   Ripoche Hugues H   Sissoko Mariam M   Thiébaut Antonin A   Merhej Jawad J   Delaveau Thierry T   Fasseu Laure L   Benaissa Sabrina S   Lorieux Geneviève G   Jourdren Laurent L   Le Crom Stéphane S   Lelandais Gaëlle G   Corel Eduardo E   Devaux Frédéric F  

Frontiers in microbiology 20181116

In this work, we used comparative transcriptomics to identify regulatory outliers (ROs) in the human pathogen <i>Candida glabrata</i>. ROs are genes that have very different expression patterns compared to their orthologs in other species. From comparative transcriptome analyses of the response of eight yeast species to toxic doses of selenite, a pleiotropic stress inducer, we identified 38 ROs in <i>C. glabrata</i>. Using transcriptome analyses of <i>C. glabrata</i> response to five different s  ...[more]

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